| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932272
Identifier: 220932272
GI number: 220932272
Start: 1521802
End: 1522326
Strand: Reverse
Name: 220932272
Synonym: Hore_14360
Alternate gene names: NA
Gene position: 1522326-1521802 (Counterclockwise)
Preceding gene: 220932273
Following gene: 220932271
Centisome position: 59.05
GC content: 42.67
Gene sequence:
>525_bases ATGAGCAGGCAGAATACTTTTTCACTTACCATTATGGTAATTGTTATGGCCCTGCTGGCAATATTTGTTGGTTATCTACT GGGGAACTGGTTAATCCAGATGGTAACCGGTGACCCCGGCCAAAATACTCAACAGGTTGTTGAAGACAAAATTATTGAAG AAGAGATTGTGGATGATCAGGGAAATACTCAAAAAACTCCCTCACCAGAGACATCAGGGGATATGACAGGGGAAGAAAAT TTAAATGGGAAAAGTGTTGACCCTGACCAGGATGTCATCGAATATAAGTATATAAAACAGCAGCTACAGGGAGAAGAAGT CTACGCAGTCCAGGTTGGGGCCTTTAATAACTATAATAATGCCCTGAGGTTAAAACAGGAACTTGAAGAAAAAGGGCTCC AGGCGGTTATTACTGAAGGGGTCCCCTATAAAGTTCAACTGGGGGCAACGACCGACAGGCAGGAAGCTGAACAGACAGAA AAAGTCGTTGAATCTCTTGGATATGATGCCTTTATTACCCACTAA
Upstream 100 bases:
>100_bases TTCTCTATATACAGTTTCAGAAGCTAAAATATTAGTTCAAAGTGGTATAAAACATAACAGTCAATCATAATAGTATAAAG AAAAGGAGTGTGGTGAAAAA
Downstream 100 bases:
>100_bases TTTGTGGGGTTTTTTTTTGGGTTGTTTTTGTCCAGGATTTAATATATAATATTTTTAGCATATGCCTGTTTTATTTTTTA TTTAATATATATTCTTTTGT
Product: Sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain-Containing Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSRQNTFSLTIMVIVMALLAIFVGYLLGNWLIQMVTGDPGQNTQQVVEDKIIEEEIVDDQGNTQKTPSPETSGDMTGEEN LNGKSVDPDQDVIEYKYIKQQLQGEEVYAVQVGAFNNYNNALRLKQELEEKGLQAVITEGVPYKVQLGATTDRQEAEQTE KVVESLGYDAFITH
Sequences:
>Translated_174_residues MSRQNTFSLTIMVIVMALLAIFVGYLLGNWLIQMVTGDPGQNTQQVVEDKIIEEEIVDDQGNTQKTPSPETSGDMTGEEN LNGKSVDPDQDVIEYKYIKQQLQGEEVYAVQVGAFNNYNNALRLKQELEEKGLQAVITEGVPYKVQLGATTDRQEAEQTE KVVESLGYDAFITH >Mature_173_residues SRQNTFSLTIMVIVMALLAIFVGYLLGNWLIQMVTGDPGQNTQQVVEDKIIEEEIVDDQGNTQKTPSPETSGDMTGEENL NGKSVDPDQDVIEYKYIKQQLQGEEVYAVQVGAFNNYNNALRLKQELEEKGLQAVITEGVPYKVQLGATTDRQEAEQTEK VVESLGYDAFITH
Specific function: Unknown
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19420; Mature: 19289
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQNTFSLTIMVIVMALLAIFVGYLLGNWLIQMVTGDPGQNTQQVVEDKIIEEEIVDDQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC GNTQKTPSPETSGDMTGEENLNGKSVDPDQDVIEYKYIKQQLQGEEVYAVQVGAFNNYNN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH ALRLKQELEEKGLQAVITEGVPYKVQLGATTDRQEAEQTEKVVESLGYDAFITH HHHHHHHHHHHHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure SRQNTFSLTIMVIVMALLAIFVGYLLGNWLIQMVTGDPGQNTQQVVEDKIIEEEIVDDQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC GNTQKTPSPETSGDMTGEENLNGKSVDPDQDVIEYKYIKQQLQGEEVYAVQVGAFNNYNN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH ALRLKQELEEKGLQAVITEGVPYKVQLGATTDRQEAEQTEKVVESLGYDAFITH HHHHHHHHHHHHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA