| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is pgsA [H]
Identifier: 220932033
GI number: 220932033
Start: 1290872
End: 1291429
Strand: Reverse
Name: pgsA [H]
Synonym: Hore_11960
Alternate gene names: 220932033
Gene position: 1291429-1290872 (Counterclockwise)
Preceding gene: 220932034
Following gene: 220932032
Centisome position: 50.09
GC content: 38.53
Gene sequence:
>558_bases ATGAATTTGCCTAATAAATTAACATTGACCCGTATAATACTCGTACCTGTTTTTATGGGTTTTTTATTTCTCCGTAAGGA CTACCCCGGTTATGCTGAAGTACTGGCCTTGATAACATTTGTTGTTGCAGCGGTTACCGATGGACTTGATGGATACCTGG CCCGTAAACACAAAATTGTAACCAAATTTGGAAAGATTGTTGATCCTCTGGCCGATAAACTGTTAATATCAGCAGCCTTA ATTTCATTTGTGGCTATGAAAGAAATTTCAGCCTGGGCTGCAATTATTATTATAGGCCGGGAACTGGCCATTACGGGCTT AAGGGTAGTTGCTGCCAGTGAAGGTTCTGTTATTTCGGCCAGCTACTGGGGAAAATGGAAAACTACCCTACAGATTATTG CAATAATAGCTTTGATCCTTGATCCTGAGATTATTCCACTTCCTTTTAATCTGTCCAGTATTCTCTTATGGGTTGCTGTA ACCATTACGGTTATATCAGGAATTATGTACTTTAAAAATGCCGACATTGACTTTTTTAAAGAAGAAAAGGATGAATAA
Upstream 100 bases:
>100_bases CAGGTTTATGTCTCCTGTAATGGAAAAATTAGTGAAGGTGACATGATTTTATGCAGGGTTACTGAGGCTTATGAATATGA TTTACTGGGAGAGTGTATTT
Downstream 100 bases:
>100_bases AGATATGTTCAGGATACTAAATAAAGTAATAGCAACAGGTTTTTTCTCAGGATATCTCCCTGTGGCCCCTGGAACCTGGG GTTCATTACTGGCATTAATT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNLPNKLTLTRIILVPVFMGFLFLRKDYPGYAEVLALITFVVAAVTDGLDGYLARKHKIVTKFGKIVDPLADKLLISAAL ISFVAMKEISAWAAIIIIGRELAITGLRVVAASEGSVISASYWGKWKTTLQIIAIIALILDPEIIPLPFNLSSILLWVAV TITVISGIMYFKNADIDFFKEEKDE
Sequences:
>Translated_185_residues MNLPNKLTLTRIILVPVFMGFLFLRKDYPGYAEVLALITFVVAAVTDGLDGYLARKHKIVTKFGKIVDPLADKLLISAAL ISFVAMKEISAWAAIIIIGRELAITGLRVVAASEGSVISASYWGKWKTTLQIIAIIALILDPEIIPLPFNLSSILLWVAV TITVISGIMYFKNADIDFFKEEKDE >Mature_185_residues MNLPNKLTLTRIILVPVFMGFLFLRKDYPGYAEVLALITFVVAAVTDGLDGYLARKHKIVTKFGKIVDPLADKLLISAAL ISFVAMKEISAWAAIIIIGRELAITGLRVVAASEGSVISASYWGKWKTTLQIIAIIALILDPEIIPLPFNLSSILLWVAV TITVISGIMYFKNADIDFFKEEKDE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=185, Percent_Identity=36.2162162162162, Blast_Score=93, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6320059, Length=211, Percent_Identity=31.2796208530806, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20399; Mature: 20399
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPNKLTLTRIILVPVFMGFLFLRKDYPGYAEVLALITFVVAAVTDGLDGYLARKHKIV CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TKFGKIVDPLADKLLISAALISFVAMKEISAWAAIIIIGRELAITGLRVVAASEGSVISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHEEEEEECCCCEEEE SYWGKWKTTLQIIAIIALILDPEIIPLPFNLSSILLWVAVTITVISGIMYFKNADIDFFK CCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EEKDE CCCCC >Mature Secondary Structure MNLPNKLTLTRIILVPVFMGFLFLRKDYPGYAEVLALITFVVAAVTDGLDGYLARKHKIV CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TKFGKIVDPLADKLLISAALISFVAMKEISAWAAIIIIGRELAITGLRVVAASEGSVISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHEEEEEECCCCEEEE SYWGKWKTTLQIIAIIALILDPEIIPLPFNLSSILLWVAVTITVISGIMYFKNADIDFFK CCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EEKDE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7750561; 9384377 [H]