| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is pgpA [H]
Identifier: 220932032
GI number: 220932032
Start: 1290427
End: 1290867
Strand: Reverse
Name: pgpA [H]
Synonym: Hore_11950
Alternate gene names: 220932032
Gene position: 1290867-1290427 (Counterclockwise)
Preceding gene: 220932033
Following gene: 220932031
Centisome position: 50.07
GC content: 34.47
Gene sequence:
>441_bases ATGTTCAGGATACTAAATAAAGTAATAGCAACAGGTTTTTTCTCAGGATATCTCCCTGTGGCCCCTGGAACCTGGGGTTC ATTACTGGCATTAATTTTAATTATATTTTTTCCGGGATTACTTACTATCCCGGTGCTCCTTTTGACCATTGTAACAGGAA TAACAGTCGCTTCCCTTGAAGAAAATTTTACAGGAATAAAAGATAAACCCAGCATTGTAATTGATGAAATAACCGGTATT TTTATCACATTTACAGGGGTTGAAATCAACTGGTGGGTTTTATTAGCAGGGTTTATCCTATTCAGGTTTTTTGATATTTT CAAGCCATTTCCAATAAATAGGTCTCAGAATTTACCCTCAGGACTAGGAATTATGATGGATGATATTCTGGCTGGATTAT TAAGTATGTCTATTATTAAACTGGTCTTTATTTTTATATAG
Upstream 100 bases:
>100_bases CTCTTATGGGTTGCTGTAACCATTACGGTTATATCAGGAATTATGTACTTTAAAAATGCCGACATTGACTTTTTTAAAGA AGAAAAGGATGAATAAAGAT
Downstream 100 bases:
>100_bases CTTCCTTTAATAACTATTAAAAATAGTTTTTGACTTTATTTATTAGATAACCGGATTTGTCTAATGGATTGGTCCGGTTA TATTTTTTTCTGGTAAAGAT
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MFRILNKVIATGFFSGYLPVAPGTWGSLLALILIIFFPGLLTIPVLLLTIVTGITVASLEENFTGIKDKPSIVIDEITGI FITFTGVEINWWVLLAGFILFRFFDIFKPFPINRSQNLPSGLGIMMDDILAGLLSMSIIKLVFIFI
Sequences:
>Translated_146_residues MFRILNKVIATGFFSGYLPVAPGTWGSLLALILIIFFPGLLTIPVLLLTIVTGITVASLEENFTGIKDKPSIVIDEITGI FITFTGVEINWWVLLAGFILFRFFDIFKPFPINRSQNLPSGLGIMMDDILAGLLSMSIIKLVFIFI >Mature_146_residues MFRILNKVIATGFFSGYLPVAPGTWGSLLALILIIFFPGLLTIPVLLLTIVTGITVASLEENFTGIKDKPSIVIDEITGI FITFTGVEINWWVLLAGFILFRFFDIFKPFPINRSQNLPSGLGIMMDDILAGLLSMSIIKLVFIFI
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=141, Percent_Identity=39.0070921985816, Blast_Score=93, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 16157; Mature: 16157
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRILNKVIATGFFSGYLPVAPGTWGSLLALILIIFFPGLLTIPVLLLTIVTGITVASLE CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENFTGIKDKPSIVIDEITGIFITFTGVEINWWVLLAGFILFRFFDIFKPFPINRSQNLPS HHCCCCCCCCCEEHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GLGIMMDDILAGLLSMSIIKLVFIFI CHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFRILNKVIATGFFSGYLPVAPGTWGSLLALILIIFFPGLLTIPVLLLTIVTGITVASLE CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENFTGIKDKPSIVIDEITGIFITFTGVEINWWVLLAGFILFRFFDIFKPFPINRSQNLPS HHCCCCCCCCCEEHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GLGIMMDDILAGLLSMSIIKLVFIFI CHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]