Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is recX [H]

Identifier: 220932025

GI number: 220932025

Start: 1282965

End: 1283444

Strand: Reverse

Name: recX [H]

Synonym: Hore_11880

Alternate gene names: 220932025

Gene position: 1283444-1282965 (Counterclockwise)

Preceding gene: 220932026

Following gene: 220932024

Centisome position: 49.78

GC content: 30.83

Gene sequence:

>480_bases
TTGGAGGAGGATATATATCAAAAAGCCAAGGATGATGCATTTCGGCTCCTATCTTATCGGGAGCGGAGCCAGTATGAGCT
AGCCAGCAGGTTGATTAAAAAAGGATATTCTAAAAATGTAGCAGATAAGGTTGTAAACCATCTCAAAACATTGGGATATA
TAGATGATTATAGATTTTGCGAAAAATATGTTAGGCATAAAATAAAGAATAATCCCAGGGGAAAGATGCTTTTGTATTAT
GAATTAAGGAAGAAGGGATTGGACGAGGGTACCATTAGAAATGTATTAGAGGAAATGGTCCCTGAAGAAACTGAAATTAA
TATAGGAATAAAACTTGCTACAAAATGGTTACATCATAACCATAATATTAATAAAAAGTTATCAAAATTGAAGAGATATC
TTAATCGAAAGGGATTTAGTTTATATATAATCCATAAAATTATTAATCAGATTGAAAACAATAATGAGAAAACATATTAA

Upstream 100 bases:

>100_bases
GATGAAGTTGCCTCAACTAAAGAAAATAAATCAACTGGAAAATCGAAAGCTAAAGGTAAGAAAAAGTGATATAAATTATA
TATAATAAGGGATGATAACC

Downstream 100 bases:

>100_bases
TATTATGTATAAGGACATCTTCTTATAATTTTACAGTTGTTTTTTATAAAGGACCGCCCTTTAGCTATGGCGGTCTTTGT
CTTTATTTCGGGTATTATTT

Product: regulatory protein RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFCEKYVRHKIKNNPRGKMLLYY
ELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHNHNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY

Sequences:

>Translated_159_residues
MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFCEKYVRHKIKNNPRGKMLLYY
ELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHNHNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY
>Mature_159_residues
MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFCEKYVRHKIKNNPRGKMLLYY
ELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHNHNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 19136; Mature: 19136

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH
EKYVRHKIKNNPRGKMLLYYELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHN
HHHHHHHHCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
HNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH
EKYVRHKIKNNPRGKMLLYYELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHN
HHHHHHHHCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
HNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140972 [H]