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The map label for this gene is recA [H]

Identifier: 220932026

GI number: 220932026

Start: 1283476

End: 1284549

Strand: Reverse

Name: recA [H]

Synonym: Hore_11890

Alternate gene names: 220932026

Gene position: 1284549-1283476 (Counterclockwise)

Preceding gene: 220932027

Following gene: 220932025

Centisome position: 49.82

GC content: 41.99

Gene sequence:

>1074_bases
GTGGTAATTTTGGCTAAAAACGAGAAGGAAAAAGCTCTGGAGATGGCTGTAAAACGTATAGAAAAACAATTTGGGCAGGG
GTCTATTATGAAACTGGGAGAGGCTACTGCCCTTAATGTAGAAGTTATTCCAACAGGTGCTTTACCCCTTGATTTAGCAT
TAGGGGTAGGGGGTGTTCCCAGGGGTAGAATTATTGAAATCTATGGACCTGAATCCTCGGGTAAGACTACTCTGGCTTTA
CACATAATTGCTGAAGCCCAGAAACGCAACGGGGTTGCTGCTTTTATTGATGCTGAACATGCCCTTGATCCCAAATATTC
AGAGAATCTGGGGGTTAACATCGATAATTTATTGATATCACAGCCAAATAATGGTGAAGAAGCCCTGGAAATAGCCGAAG
CCCTCGTGCGCAGTAATGCCATCGATGTAATTGTTATAGATTCTGTTGCTGCTCTTGTTCCCAAGGCTGAACTGGATGGA
GAAATGGGAGATAGTCATGTTGGTTTACAGGCCCGGTTAATGTCCCAGGCCATGAGGAAATTATCGGGTGCTATCAGTAA
ATCAAAGACTGTCTGCATTTTTATTAACCAGATCAGAGAAAAGGTCGGGGTAATGTTTGGTAATCCCGAAACAACTCCAG
GTGGACGAGCCCTTAAATTTTATTCTTCAGTAAGAATGGAAATCAGAAAAACTCAGACCCTGAAAAATGGAGATGAAATA
GTAGGGAGTCAGACCAGGGTGAAAGTTGTTAAAAACAAAGTTGCTCCTCCATTCAGGCGGGCTATTTTTGATATTATGTA
TGGAACGGGTATATCGACATCAGGATGTATCCTCGATATGGGGGTTGATACCGGAATTATTGACAGGGCTGGTTCCTGGT
ATTCCTATGGTGATGAGCGTCTGGGACAGGGACGTGAAAATGCTAAAAACTTCCTTGAAGATAACCCGGATATTATGAAA
GAAATTGAAATGAAGATTAAAGAACGGGTAGGTCTGGAAGTGGAGGATGAAGTTGCCTCAACTAAAGAAAATAAATCAAC
TGGAAAATCGAAAGCTAAAGGTAAGAAAAAGTGA

Upstream 100 bases:

>100_bases
AATAACCCTTGCTTTTTTAAAACATATGTTCTATAATGTTAACTAACAGGACTGAACATATTTTCGGTTTTTGTAATAAT
TCAAAAATTGGTGGGAAGGT

Downstream 100 bases:

>100_bases
TATAAATTATATATAATAAGGGATGATAACCTTGGAGGAGGATATATATCAAAAAGCCAAGGATGATGCATTTCGGCTCC
TATCTTATCGGGAGCGGAGC

Product: recA protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MVILAKNEKEKALEMAVKRIEKQFGQGSIMKLGEATALNVEVIPTGALPLDLALGVGGVPRGRIIEIYGPESSGKTTLAL
HIIAEAQKRNGVAAFIDAEHALDPKYSENLGVNIDNLLISQPNNGEEALEIAEALVRSNAIDVIVIDSVAALVPKAELDG
EMGDSHVGLQARLMSQAMRKLSGAISKSKTVCIFINQIREKVGVMFGNPETTPGGRALKFYSSVRMEIRKTQTLKNGDEI
VGSQTRVKVVKNKVAPPFRRAIFDIMYGTGISTSGCILDMGVDTGIIDRAGSWYSYGDERLGQGRENAKNFLEDNPDIMK
EIEMKIKERVGLEVEDEVASTKENKSTGKSKAKGKKK

Sequences:

>Translated_357_residues
MVILAKNEKEKALEMAVKRIEKQFGQGSIMKLGEATALNVEVIPTGALPLDLALGVGGVPRGRIIEIYGPESSGKTTLAL
HIIAEAQKRNGVAAFIDAEHALDPKYSENLGVNIDNLLISQPNNGEEALEIAEALVRSNAIDVIVIDSVAALVPKAELDG
EMGDSHVGLQARLMSQAMRKLSGAISKSKTVCIFINQIREKVGVMFGNPETTPGGRALKFYSSVRMEIRKTQTLKNGDEI
VGSQTRVKVVKNKVAPPFRRAIFDIMYGTGISTSGCILDMGVDTGIIDRAGSWYSYGDERLGQGRENAKNFLEDNPDIMK
EIEMKIKERVGLEVEDEVASTKENKSTGKSKAKGKKK
>Mature_357_residues
MVILAKNEKEKALEMAVKRIEKQFGQGSIMKLGEATALNVEVIPTGALPLDLALGVGGVPRGRIIEIYGPESSGKTTLAL
HIIAEAQKRNGVAAFIDAEHALDPKYSENLGVNIDNLLISQPNNGEEALEIAEALVRSNAIDVIVIDSVAALVPKAELDG
EMGDSHVGLQARLMSQAMRKLSGAISKSKTVCIFINQIREKVGVMFGNPETTPGGRALKFYSSVRMEIRKTQTLKNGDEI
VGSQTRVKVVKNKVAPPFRRAIFDIMYGTGISTSGCILDMGVDTGIIDRAGSWYSYGDERLGQGRENAKNFLEDNPDIMK
EIEMKIKERVGLEVEDEVASTKENKSTGKSKAKGKKK

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=320, Percent_Identity=63.4375, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38684; Mature: 38684

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILAKNEKEKALEMAVKRIEKQFGQGSIMKLGEATALNVEVIPTGALPLDLALGVGGVP
CEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCHHHHHCCCCCC
RGRIIEIYGPESSGKTTLALHIIAEAQKRNGVAAFIDAEHALDPKYSENLGVNIDNLLIS
CCCEEEEECCCCCCCEEEEEEEEEHHHHCCCEEEEEECHHCCCCCCCCCCCCCHHHEEEE
QPNNGEEALEIAEALVRSNAIDVIVIDSVAALVPKAELDGEMGDSHVGLQARLMSQAMRK
CCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHH
LSGAISKSKTVCIFINQIREKVGVMFGNPETTPGGRALKFYSSVRMEIRKTQTLKNGDEI
HHHHHHCCCEEEEEHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VGSQTRVKVVKNKVAPPFRRAIFDIMYGTGISTSGCILDMGVDTGIIDRAGSWYSYGDER
HCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCCHHH
LGQGRENAKNFLEDNPDIMKEIEMKIKERVGLEVEDEVASTKENKSTGKSKAKGKKK
HCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVILAKNEKEKALEMAVKRIEKQFGQGSIMKLGEATALNVEVIPTGALPLDLALGVGGVP
CEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCHHHHHCCCCCC
RGRIIEIYGPESSGKTTLALHIIAEAQKRNGVAAFIDAEHALDPKYSENLGVNIDNLLIS
CCCEEEEECCCCCCCEEEEEEEEEHHHHCCCEEEEEECHHCCCCCCCCCCCCCHHHEEEE
QPNNGEEALEIAEALVRSNAIDVIVIDSVAALVPKAELDGEMGDSHVGLQARLMSQAMRK
CCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHH
LSGAISKSKTVCIFINQIREKVGVMFGNPETTPGGRALKFYSSVRMEIRKTQTLKNGDEI
HHHHHHCCCEEEEEHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VGSQTRVKVVKNKVAPPFRRAIFDIMYGTGISTSGCILDMGVDTGIIDRAGSWYSYGDER
HCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCCHHH
LGQGRENAKNFLEDNPDIMKEIEMKIKERVGLEVEDEVASTKENKSTGKSKAKGKKK
HCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA