| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932024
Identifier: 220932024
GI number: 220932024
Start: 1281217
End: 1282761
Strand: Reverse
Name: 220932024
Synonym: Hore_11870
Alternate gene names: NA
Gene position: 1282761-1281217 (Counterclockwise)
Preceding gene: 220932025
Following gene: 220932023
Centisome position: 49.76
GC content: 38.51
Gene sequence:
>1545_bases GTGAATAATATTAATGGAGGTGCGCTTTATGTAATTATTGCTTTACCACTGGGGATATTATTAGGTTATTTAATTAGAAA ATATATTGCTGAAGCCAGGATTCAGACGGCTGAAGAAGAAGCCAGAAAGCTCCTTCAGGAAGCAGAACGAAATGCAGAAT CACAAAAAAGAGAGATAATTATTGAGGCCAAGGAAATTGCCCATAATATTAAAGAAGAGGCTAATAGAGAAACTCAAAAG CGTCGAAATGAACTCCAGAGAATAGAAGATCGACTGGTTAATAAGGAAGAATCCCTGGACCGGAAAACCGAAATTCTGGA GAAAAAAGAACAGAGTTTAAGAGATAAAGAAAGTAATCTCGATAAATTAGAATCTGAAATTAAAGAACTTAAAGAAAAAG AACTAAAAACCCTTGAAGAAATATCTAAATTTACCCAGGAAGAAGCAAAGGAGTATTTATTTAAAAAAGTTGAAGAAGAA TTAGACCACGAATTCGCTAAAATGATTAAAGAAAAAGAGGCTAAAGCCAAAGAAGAAGCAGATAAAAAGGCACGTGAAAT ATTATCACTGGCTATACAGAGATGTGCAGCAGACCATGTTGCTGAAACAACTGTCTCGGTTGTGTCTTTGCCCAATGATG AAATGAAGGGACGAATAATTGGTCGTGAAGGTAGAAATATCCGCACCCTGGAAAGCCTGACTGGAATTGATCTTATCATA GATGACACACCTGAAGCAGTTGTAATTTCAGGCTTTGATCCCATCAGACGTGAAATAGCCAGAATTGCCCTCGAAAAACT GATAGTAGATGGAAGAATACATCCGGCACGAATTGAAGAAATGGTAGAAAAGGCCAGAAAAGAACTTGATGCCCATATAA GGGAAGTAGGAGAAGAGGCTACTTTTGATGCTGGAGTTCATGGTTTACATCCGGAACTTGTAAAACTACTAGGAAGACTT AAATATCGGACCAGTTATGGCCAGAATGTATTACAGCACTCCCTTGAAGTATCCTATTTAGCTGGAATAATGGCTGCTGA ACTTGGAGCCGATATTAACCTGGCTAAACGTGGTGGACTTTTACATGATATTGGAAAATCCATAGACCATGAAGTAGAGG GTCCACATGTTAAAATCGGGGTAGATATTGCCCGTAAATACGGAGAGTCTGATAAGGTTCTTCATATTATCGAAGCCCAT CATGGTGATTTTGAATTTAAATCTGTCGAAGCAGTACTGGTCTCTGCTGCTGATGCAATATCAGCTGCTCGACCAGGTGC TAGAAGGGAAACGCTGGAAGCTTACATTAAACGTCTGGAAGAATTAGAAAAGCTGGCTAATTCTTTTAATGGTGTTGAAA AGGCTTATGCGATTCAGGCCGGTAGAGAAATAAGGGTTATAGTTGAGTCTGATAAAGTTGATGATTCTAAAGCAGCTAAA CTATCCCGGGATTTGGCTCAGAAAATTGAAGATAATCTGGATTATCCCGGTCAGATTAAAGTTGTTGTTATCAGGGAAAC AAGGGCAATTGATTACGCCAAATAA
Upstream 100 bases:
>100_bases CATTTCTTGACAGGTCTAAAGAAAAGATATAAAATAATATCAGGCGTTTTCCCAATTGATTTCAAGGAGATTTCTAAATA CAACTAAATAAAGTTAGGAG
Downstream 100 bases:
>100_bases AATTTGAAAATCCGGGCTCCTTATGGAGCCCTTTTTATAATCACAAAAATGTTTGAATCAAATAAAGATAGAGAAAATTT TTTATATATTTTTTTCAAAT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MNNINGGALYVIIALPLGILLGYLIRKYIAEARIQTAEEEARKLLQEAERNAESQKREIIIEAKEIAHNIKEEANRETQK RRNELQRIEDRLVNKEESLDRKTEILEKKEQSLRDKESNLDKLESEIKELKEKELKTLEEISKFTQEEAKEYLFKKVEEE LDHEFAKMIKEKEAKAKEEADKKAREILSLAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRTLESLTGIDLII DDTPEAVVISGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKARKELDAHIREVGEEATFDAGVHGLHPELVKLLGRL KYRTSYGQNVLQHSLEVSYLAGIMAAELGADINLAKRGGLLHDIGKSIDHEVEGPHVKIGVDIARKYGESDKVLHIIEAH HGDFEFKSVEAVLVSAADAISAARPGARRETLEAYIKRLEELEKLANSFNGVEKAYAIQAGREIRVIVESDKVDDSKAAK LSRDLAQKIEDNLDYPGQIKVVVIRETRAIDYAK
Sequences:
>Translated_514_residues MNNINGGALYVIIALPLGILLGYLIRKYIAEARIQTAEEEARKLLQEAERNAESQKREIIIEAKEIAHNIKEEANRETQK RRNELQRIEDRLVNKEESLDRKTEILEKKEQSLRDKESNLDKLESEIKELKEKELKTLEEISKFTQEEAKEYLFKKVEEE LDHEFAKMIKEKEAKAKEEADKKAREILSLAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRTLESLTGIDLII DDTPEAVVISGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKARKELDAHIREVGEEATFDAGVHGLHPELVKLLGRL KYRTSYGQNVLQHSLEVSYLAGIMAAELGADINLAKRGGLLHDIGKSIDHEVEGPHVKIGVDIARKYGESDKVLHIIEAH HGDFEFKSVEAVLVSAADAISAARPGARRETLEAYIKRLEELEKLANSFNGVEKAYAIQAGREIRVIVESDKVDDSKAAK LSRDLAQKIEDNLDYPGQIKVVVIRETRAIDYAK >Mature_514_residues MNNINGGALYVIIALPLGILLGYLIRKYIAEARIQTAEEEARKLLQEAERNAESQKREIIIEAKEIAHNIKEEANRETQK RRNELQRIEDRLVNKEESLDRKTEILEKKEQSLRDKESNLDKLESEIKELKEKELKTLEEISKFTQEEAKEYLFKKVEEE LDHEFAKMIKEKEAKAKEEADKKAREILSLAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRTLESLTGIDLII DDTPEAVVISGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKARKELDAHIREVGEEATFDAGVHGLHPELVKLLGRL KYRTSYGQNVLQHSLEVSYLAGIMAAELGADINLAKRGGLLHDIGKSIDHEVEGPHVKIGVDIARKYGESDKVLHIIEAH HGDFEFKSVEAVLVSAADAISAARPGARRETLEAYIKRLEELEKLANSFNGVEKAYAIQAGREIRVIVESDKVDDSKAAK LSRDLAQKIEDNLDYPGQIKVVVIRETRAIDYAK
Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017705 - InterPro: IPR022711 - InterPro: IPR004087 - InterPro: IPR004088 - InterPro: IPR018111 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]
EC number: =3.1.4.16 [H]
Molecular weight: Translated: 58122; Mature: 58122
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50084 KH_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNINGGALYVIIALPLGILLGYLIRKYIAEARIQTAEEEARKLLQEAERNAESQKREII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IEAKEIAHNIKEEANRETQKRRNELQRIEDRLVNKEESLDRKTEILEKKEQSLRDKESNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH DKLESEIKELKEKELKTLEEISKFTQEEAKEYLFKKVEEELDHEFAKMIKEKEAKAKEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKKAREILSLAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRTLESLTGIDLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEECCCCCCCHHHHHHCCCEEEE DDTPEAVVISGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKARKELDAHIREVGEEA ECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH TFDAGVHGLHPELVKLLGRLKYRTSYGQNVLQHSLEVSYLAGIMAAELGADINLAKRGGL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCH LHDIGKSIDHEVEGPHVKIGVDIARKYGESDKVLHIIEAHHGDFEFKSVEAVLVSAADAI HHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH SAARPGARRETLEAYIKRLEELEKLANSFNGVEKAYAIQAGREIRVIVESDKVDDSKAAK HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCCCCCHHHHH LSRDLAQKIEDNLDYPGQIKVVVIRETRAIDYAK HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MNNINGGALYVIIALPLGILLGYLIRKYIAEARIQTAEEEARKLLQEAERNAESQKREII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IEAKEIAHNIKEEANRETQKRRNELQRIEDRLVNKEESLDRKTEILEKKEQSLRDKESNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH DKLESEIKELKEKELKTLEEISKFTQEEAKEYLFKKVEEELDHEFAKMIKEKEAKAKEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKKAREILSLAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRTLESLTGIDLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEECCCCCCCHHHHHHCCCEEEE DDTPEAVVISGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKARKELDAHIREVGEEA ECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH TFDAGVHGLHPELVKLLGRLKYRTSYGQNVLQHSLEVSYLAGIMAAELGADINLAKRGGL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCH LHDIGKSIDHEVEGPHVKIGVDIARKYGESDKVLHIIEAHHGDFEFKSVEAVLVSAADAI HHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH SAARPGARRETLEAYIKRLEELEKLANSFNGVEKAYAIQAGREIRVIVESDKVDDSKAAK HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCCCCCHHHHH LSRDLAQKIEDNLDYPGQIKVVVIRETRAIDYAK HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA