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The map label for this gene is ylbH [H]

Identifier: 220931856

GI number: 220931856

Start: 1104142

End: 1104678

Strand: Direct

Name: ylbH [H]

Synonym: Hore_10130

Alternate gene names: 220931856

Gene position: 1104142-1104678 (Clockwise)

Preceding gene: 220931855

Following gene: 220931857

Centisome position: 42.83

GC content: 39.29

Gene sequence:

>537_bases
GTGAGAATTATTTCAGGGATTGCCAGGGGAAGAAGATTAAAAAGCATCAGGGGTTCGGGAACCCGACCCACTACTGATAG
GGTGAAGGAGGCTTTATTCAATATCCTGGGACAGTCGGTTATTGAAACAGATGTCCTTGATCTCTTTGCCGGGTTTGGTA
GTCTGGGCCTGGAGGCCTTAAGCCGTGGCGCTAATTCTGCTGTTTTTGTAGAAAAAAATTATCGTAATGTTAATGTTATA
AATGATAATATAAAGCTTTGTGGTTTTGAAGAGCTGGCTGATGTAGTTAAAAAAGATGTATTTACTTATCTTCGGGAAAC
CGGTTCTGATTTTGATGTAATATTTATGGACCCTCCTTACCATAAGAAACTGGCAAATAAAGCGGTTGGTTTGATTGTTG
CAGGTCGGATAATAAGAGAGCAGGGGTTAATTGTTATAGAACACCATCCCGGAGAAGAAATAATTACACCGGAAGAACTG
GACTTAATAACAAACAGGGAATATGGTAAAAGTGGAATAACAATTCTAAAAAAGTAG

Upstream 100 bases:

>100_bases
TATTATGACTCCAAAACACCTTAAATATACATCTAATAATAATTTATTTACAAGGAAAAAATAGGTATTCAGGAAGGGTA
ATTACCAAGGAGGAATATTA

Downstream 100 bases:

>100_bases
GTGGTATATATGTTAAACAGGGTTGTTTATCCAGGTAGTTTTGATCCAGTAACATATGGACATTTAGATATTATAAAAAG
GGCAGCCCAGATATTTGATG

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRIISGIARGRRLKSIRGSGTRPTTDRVKEALFNILGQSVIETDVLDLFAGFGSLGLEALSRGANSAVFVEKNYRNVNVI
NDNIKLCGFEELADVVKKDVFTYLRETGSDFDVIFMDPPYHKKLANKAVGLIVAGRIIREQGLIVIEHHPGEEIITPEEL
DLITNREYGKSGITILKK

Sequences:

>Translated_178_residues
MRIISGIARGRRLKSIRGSGTRPTTDRVKEALFNILGQSVIETDVLDLFAGFGSLGLEALSRGANSAVFVEKNYRNVNVI
NDNIKLCGFEELADVVKKDVFTYLRETGSDFDVIFMDPPYHKKLANKAVGLIVAGRIIREQGLIVIEHHPGEEIITPEEL
DLITNREYGKSGITILKK
>Mature_178_residues
MRIISGIARGRRLKSIRGSGTRPTTDRVKEALFNILGQSVIETDVLDLFAGFGSLGLEALSRGANSAVFVEKNYRNVNVI
NDNIKLCGFEELADVVKKDVFTYLRETGSDFDVIFMDPPYHKKLANKAVGLIVAGRIIREQGLIVIEHHPGEEIITPEEL
DLITNREYGKSGITILKK

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=147, Percent_Identity=36.0544217687075, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 19757; Mature: 19757

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIISGIARGRRLKSIRGSGTRPTTDRVKEALFNILGQSVIETDVLDLFAGFGSLGLEAL
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGANSAVFVEKNYRNVNVINDNIKLCGFEELADVVKKDVFTYLRETGSDFDVIFMDPPY
HCCCCCEEEEECCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
HKKLANKAVGLIVAGRIIREQGLIVIEHHPGEEIITPEELDLITNREYGKSGITILKK
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEECC
>Mature Secondary Structure
MRIISGIARGRRLKSIRGSGTRPTTDRVKEALFNILGQSVIETDVLDLFAGFGSLGLEAL
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGANSAVFVEKNYRNVNVINDNIKLCGFEELADVVKKDVFTYLRETGSDFDVIFMDPPY
HCCCCCEEEEECCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
HKKLANKAVGLIVAGRIIREQGLIVIEHHPGEEIITPEELDLITNREYGKSGITILKK
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]