| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931446
Identifier: 220931446
GI number: 220931446
Start: 654733
End: 656022
Strand: Direct
Name: 220931446
Synonym: Hore_06020
Alternate gene names: NA
Gene position: 654733-656022 (Clockwise)
Preceding gene: 220931445
Following gene: 220931447
Centisome position: 25.4
GC content: 41.24
Gene sequence:
>1290_bases ATGGTTCTTATTCTGGTCTTAATTTTCACCATGGCCATGATGCACATGGCCGGCACAGAAATTGACTTTGCAGCCCGGGA TATGAATAATATGGTGGCCTTTTACCTGGCCAGATCAGGGGCGGCTGCTTTAGCGGACTGGATAGAAAATAATGATTCCA ATACTGTCAGGGACCTCTTCTGGGTTGAGGGAGGCCGGGGAACTGACTGGTTTAACCTGGAAACAGGATTTCCCGGTGAA ATTAAGGTTCATGCTGAAGTAATATTAAATGAAGATGAGCACCGGGTGGAGGTTACTTCAGAAGGTCGAATTTACGGGAG AACAGATACAGTTAAAGTTATTCTGGTACCTGAAGGCCTGTCGCGGGAAAGGGTATTTGATATACCTTTTTTTGCTAAAG AATCGATTACAATGGAAAGTAACTCCCTGGTTGTGGGGGATCTGGGTACCAATGCCAGTAAGTTAAGTGATTTTGATATT GATTATTCTGCTGAAGTGGTTGACGGTGATCTTCAGGTGGGACCGGAAGCCACTGATGGTGTTATAAACTCCCTGGAAAG CAAAAAAGTTGTGAAAGATGGTGTAGTAAAAAGATTACCTGAAGAACGAAACTATCCACTACCCTTATTCCCCCGTTTTC CAGATGACCTGCCAGATAGAGAGTTTAATTCTTCACTTACTACTATCGATAAAGATGGCTGGTATGATGAAATTAAACTC ACCGGTAACAGGGAACTGGTTATTGATGTTGGGGATGACGCCCGTAAGATTAGAATAACCAGCCTGATTATTAATTCAGG TGAAATTACTATAATCGGGGACGGTACCCTGGAATTATATATAGATGAGGAATTTCAGGTTCTGGGTAATGGTTCTTTTA TTAATAAGGGTGGAGATCCCAATAAGGTAGTTGTTTATTATAGGGGAAATGAAGACCTTAATCTCCATGGCCAAAGACAG ATTGTTGGATCTTTGTACACTTATTATGCTGATATTGCCCTCGGTGGAAGTGGCAGTATTCTGGGTCATATTGTCAGTGG TGGTGATTATATAACTTTTAACGGTAATTATTATAATGAATATACTAAAGATTTTGTCAGGATCATTTATGCTCCCCTGG CAACCCTTGATTTACGAAGTAGGCATGATGGTCTATCAGGGGCAGTGGTTTGTAATAGGTTGATTCTGGGTGATGATTTT TCACTTAATGAGTTTTTTATCCAGGAGGCATTGCTTCCCTTTGATTTTGTAGGAGGAACTCCCTATATAATAGATCACTG GGAACAGTAG
Upstream 100 bases:
>100_bases TTTGAGGTAGCAGGGCAACCTGAGCAGGGGTGATATGGTGTAGGGGATATTTAAAATTTTAATTAAAGGAAAAAAGGGTT CAACACTGGTCCTGGTTTTA
Downstream 100 bases:
>100_bases AGAAGGGTGAAGATAGAAATGAAATTATTAAAAAAAGAGAGAGGGTTATCCTTAATAGAAGTGATGGTTTCCCTGGTTAT ATTTGCGGTAATTGTTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MVLILVLIFTMAMMHMAGTEIDFAARDMNNMVAFYLARSGAAALADWIENNDSNTVRDLFWVEGGRGTDWFNLETGFPGE IKVHAEVILNEDEHRVEVTSEGRIYGRTDTVKVILVPEGLSRERVFDIPFFAKESITMESNSLVVGDLGTNASKLSDFDI DYSAEVVDGDLQVGPEATDGVINSLESKKVVKDGVVKRLPEERNYPLPLFPRFPDDLPDREFNSSLTTIDKDGWYDEIKL TGNRELVIDVGDDARKIRITSLIINSGEITIIGDGTLELYIDEEFQVLGNGSFINKGGDPNKVVVYYRGNEDLNLHGQRQ IVGSLYTYYADIALGGSGSILGHIVSGGDYITFNGNYYNEYTKDFVRIIYAPLATLDLRSRHDGLSGAVVCNRLILGDDF SLNEFFIQEALLPFDFVGGTPYIIDHWEQ
Sequences:
>Translated_429_residues MVLILVLIFTMAMMHMAGTEIDFAARDMNNMVAFYLARSGAAALADWIENNDSNTVRDLFWVEGGRGTDWFNLETGFPGE IKVHAEVILNEDEHRVEVTSEGRIYGRTDTVKVILVPEGLSRERVFDIPFFAKESITMESNSLVVGDLGTNASKLSDFDI DYSAEVVDGDLQVGPEATDGVINSLESKKVVKDGVVKRLPEERNYPLPLFPRFPDDLPDREFNSSLTTIDKDGWYDEIKL TGNRELVIDVGDDARKIRITSLIINSGEITIIGDGTLELYIDEEFQVLGNGSFINKGGDPNKVVVYYRGNEDLNLHGQRQ IVGSLYTYYADIALGGSGSILGHIVSGGDYITFNGNYYNEYTKDFVRIIYAPLATLDLRSRHDGLSGAVVCNRLILGDDF SLNEFFIQEALLPFDFVGGTPYIIDHWEQ >Mature_429_residues MVLILVLIFTMAMMHMAGTEIDFAARDMNNMVAFYLARSGAAALADWIENNDSNTVRDLFWVEGGRGTDWFNLETGFPGE IKVHAEVILNEDEHRVEVTSEGRIYGRTDTVKVILVPEGLSRERVFDIPFFAKESITMESNSLVVGDLGTNASKLSDFDI DYSAEVVDGDLQVGPEATDGVINSLESKKVVKDGVVKRLPEERNYPLPLFPRFPDDLPDREFNSSLTTIDKDGWYDEIKL TGNRELVIDVGDDARKIRITSLIINSGEITIIGDGTLELYIDEEFQVLGNGSFINKGGDPNKVVVYYRGNEDLNLHGQRQ IVGSLYTYYADIALGGSGSILGHIVSGGDYITFNGNYYNEYTKDFVRIIYAPLATLDLRSRHDGLSGAVVCNRLILGDDF SLNEFFIQEALLPFDFVGGTPYIIDHWEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47836; Mature: 47836
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLILVLIFTMAMMHMAGTEIDFAARDMNNMVAFYLARSGAAALADWIENNDSNTVRDLF CEEHHHHHHHHHHHHHCCCCEEEHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEE WVEGGRGTDWFNLETGFPGEIKVHAEVILNEDEHRVEVTSEGRIYGRTDTVKVILVPEGL EEECCCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCEEEECCCEEEEEEECCCC SRERVFDIPFFAKESITMESNSLVVGDLGTNASKLSDFDIDYSAEVVDGDLQVGPEATDG CCCEEEECCCCCCCCEEEECCCEEEEECCCCHHHCCCCCCCCEEEEECCCEEECCCCHHH VINSLESKKVVKDGVVKRLPEERNYPLPLFPRFPDDLPDREFNSSLTTIDKDGWYDEIKL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE TGNRELVIDVGDDARKIRITSLIINSGEITIIGDGTLELYIDEEFQVLGNGSFINKGGDP ECCCEEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEEEECCCEEEEECCCEECCCCCC NKVVVYYRGNEDLNLHGQRQIVGSLYTYYADIALGGSGSILGHIVSGGDYITFNGNYYNE CEEEEEEECCCCCCCCCHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCEEEECCCCCCH YTKDFVRIIYAPLATLDLRSRHDGLSGAVVCNRLILGDDFSLNEFFIQEALLPFDFVGGT HHHHHHHHHHHHHHHEEHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHCCCEEECCCC PYIIDHWEQ CEEEECCCC >Mature Secondary Structure MVLILVLIFTMAMMHMAGTEIDFAARDMNNMVAFYLARSGAAALADWIENNDSNTVRDLF CEEHHHHHHHHHHHHHCCCCEEEHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEE WVEGGRGTDWFNLETGFPGEIKVHAEVILNEDEHRVEVTSEGRIYGRTDTVKVILVPEGL EEECCCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCEEEECCCEEEEEEECCCC SRERVFDIPFFAKESITMESNSLVVGDLGTNASKLSDFDIDYSAEVVDGDLQVGPEATDG CCCEEEECCCCCCCCEEEECCCEEEEECCCCHHHCCCCCCCCEEEEECCCEEECCCCHHH VINSLESKKVVKDGVVKRLPEERNYPLPLFPRFPDDLPDREFNSSLTTIDKDGWYDEIKL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE TGNRELVIDVGDDARKIRITSLIINSGEITIIGDGTLELYIDEEFQVLGNGSFINKGGDP ECCCEEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEEEECCCEEEEECCCEECCCCCC NKVVVYYRGNEDLNLHGQRQIVGSLYTYYADIALGGSGSILGHIVSGGDYITFNGNYYNE CEEEEEEECCCCCCCCCHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCEEEECCCCCCH YTKDFVRIIYAPLATLDLRSRHDGLSGAVVCNRLILGDDFSLNEFFIQEALLPFDFVGGT HHHHHHHHHHHHHHHEEHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHCCCEEECCCC PYIIDHWEQ CEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA