| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931447
Identifier: 220931447
GI number: 220931447
Start: 656041
End: 657591
Strand: Direct
Name: 220931447
Synonym: Hore_06030
Alternate gene names: NA
Gene position: 656041-657591 (Clockwise)
Preceding gene: 220931446
Following gene: 220931448
Centisome position: 25.45
GC content: 42.04
Gene sequence:
>1551_bases ATGAAATTATTAAAAAAAGAGAGAGGGTTATCCTTAATAGAAGTGATGGTTTCCCTGGTTATATTTGCGGTAATTGTTCT TGCTTTTGGTTCCTTTATTACCTCAAATTATAAAGGTATCCAGGAGGCCGGAGAAATGACCAGGTCAGCCCATGAAAATA AAAAGACAGTAGAGAGAATGATTGCTTCAGGACAGGTCTCCCGGGGACATTCTTTAGAGCTTGACTTCGGGGAAGACAAT ATTGTGATAGATGGTGGTATAGCTGAATCGGGGAAACTAAGAACATTTATTCCCACGGTCCCGGCCATTGTCAGTGTTAC TTCAGACCCTGAGTTTCATGTAATGGGTGAAGGACCGGTAATTATCGAGGTTGTGGTTACTACCAGAATGGTACCTGATG ACACCGCGGTTGAAGTTGAGTTGCGAACCCCTGACGATATACTGGTTGATACTGCAGTGGGGCAAATTCAGGATAACCAG GATACTCTTTATCTTAATGCTGGGGAACATCTCTCAGATGGCATTTATAATATTGTAACCAGGGTAGATGGTATCTGGTC TCCTTTTGTTATTAATTATGTCATCAGGCCCATTGTTTATGTAGTGGTAGGGGAGGATAGCACCGTTCTCTGCTCAAATG ATGGGGAAAACTGGACAGACCACAGTGAAGAGTTGCCGGTAGATGGTGTTGATTTAAATGCTATTATCTGGGGTGGACGT CCTGATGACCGGAAATTTATTATAGTCGGGGATGATGGTTATATATTTACCTCGGAGGACGGGGTTAACTGGCAGGAGGA AATAACTCCTACTGGTTCGGACCTCTATGATATTTGCTGGGCTAAAGAAAGGTATCTCGCCGTGGGTGAAGGGGGTATAA TTCTTACTTCCGACAGTGGTACTGACTGGAATAAGATATCTTTTGATGATAATGTTAACCTCTATGGGGTTACATATGGT GGTACTTCAGAAGATAGCTTTTCAGTAGCAGTTCCGGAGGCAACTCCGAATTATACTGTTGTTAAAATTGAAGGGGAAGA CCCTACCAAAAAAAATCTGACACCATCAGATAATCTTTACAGTGCTACCTGGGGAAGTCTACCCTCCAGTGGAGAAGGAG TGTTTATGGCTGCCGGTGTCCAGGATATTATCAGTTTTGATCATAATATTAAACTATTGACCGATAATGGTTATTATAAT GAGGATTATATTTTCAATGATATTGTTCCGGCTTTAATAGCAGAGACCAGTACTTTTCTGGCAGCCGGTTCTGATGGGAA AGATGGTGTAATTATGATATTAAGGAAAGTGGATAGTGGTGGACTTATCTGGGATTACCTGCATAATGTTGACGAGCTTC CTGAAATCCCCTCAAATCTGGCAGGTTTTGATGCAATAGTCTGGTTTAATGATAGATTAGTAGCCACCGGTGTTAATAAA AGCGGGAGAGAAGTAATTATTAATCTCCATTATAACGGGGATAGCTGGGAATGGCAGGATGTTTATACCGGTAGTGGGTA TGTGAGACTAAATGATGTGGTGGCCCGGTAG
Upstream 100 bases:
>100_bases TGAGTTTTTTATCCAGGAGGCATTGCTTCCCTTTGATTTTGTAGGAGGAACTCCCTATATAATAGATCACTGGGAACAGT AGAGAAGGGTGAAGATAGAA
Downstream 100 bases:
>100_bases ACCAATCGGAGGTGGTTACTGTGTTTTCAAGGTTTTTTACCAGCAATAAAGGATTAACCCTTATTGAGATATTAGTGGCC CTGGCTCTGGTAGGGATTGC
Product: prepilin-type N-terminal cleavage/methylation domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKLLKKERGLSLIEVMVSLVIFAVIVLAFGSFITSNYKGIQEAGEMTRSAHENKKTVERMIASGQVSRGHSLELDFGEDN IVIDGGIAESGKLRTFIPTVPAIVSVTSDPEFHVMGEGPVIIEVVVTTRMVPDDTAVEVELRTPDDILVDTAVGQIQDNQ DTLYLNAGEHLSDGIYNIVTRVDGIWSPFVINYVIRPIVYVVVGEDSTVLCSNDGENWTDHSEELPVDGVDLNAIIWGGR PDDRKFIIVGDDGYIFTSEDGVNWQEEITPTGSDLYDICWAKERYLAVGEGGIILTSDSGTDWNKISFDDNVNLYGVTYG GTSEDSFSVAVPEATPNYTVVKIEGEDPTKKNLTPSDNLYSATWGSLPSSGEGVFMAAGVQDIISFDHNIKLLTDNGYYN EDYIFNDIVPALIAETSTFLAAGSDGKDGVIMILRKVDSGGLIWDYLHNVDELPEIPSNLAGFDAIVWFNDRLVATGVNK SGREVIINLHYNGDSWEWQDVYTGSGYVRLNDVVAR
Sequences:
>Translated_516_residues MKLLKKERGLSLIEVMVSLVIFAVIVLAFGSFITSNYKGIQEAGEMTRSAHENKKTVERMIASGQVSRGHSLELDFGEDN IVIDGGIAESGKLRTFIPTVPAIVSVTSDPEFHVMGEGPVIIEVVVTTRMVPDDTAVEVELRTPDDILVDTAVGQIQDNQ DTLYLNAGEHLSDGIYNIVTRVDGIWSPFVINYVIRPIVYVVVGEDSTVLCSNDGENWTDHSEELPVDGVDLNAIIWGGR PDDRKFIIVGDDGYIFTSEDGVNWQEEITPTGSDLYDICWAKERYLAVGEGGIILTSDSGTDWNKISFDDNVNLYGVTYG GTSEDSFSVAVPEATPNYTVVKIEGEDPTKKNLTPSDNLYSATWGSLPSSGEGVFMAAGVQDIISFDHNIKLLTDNGYYN EDYIFNDIVPALIAETSTFLAAGSDGKDGVIMILRKVDSGGLIWDYLHNVDELPEIPSNLAGFDAIVWFNDRLVATGVNK SGREVIINLHYNGDSWEWQDVYTGSGYVRLNDVVAR >Mature_516_residues MKLLKKERGLSLIEVMVSLVIFAVIVLAFGSFITSNYKGIQEAGEMTRSAHENKKTVERMIASGQVSRGHSLELDFGEDN IVIDGGIAESGKLRTFIPTVPAIVSVTSDPEFHVMGEGPVIIEVVVTTRMVPDDTAVEVELRTPDDILVDTAVGQIQDNQ DTLYLNAGEHLSDGIYNIVTRVDGIWSPFVINYVIRPIVYVVVGEDSTVLCSNDGENWTDHSEELPVDGVDLNAIIWGGR PDDRKFIIVGDDGYIFTSEDGVNWQEEITPTGSDLYDICWAKERYLAVGEGGIILTSDSGTDWNKISFDDNVNLYGVTYG GTSEDSFSVAVPEATPNYTVVKIEGEDPTKKNLTPSDNLYSATWGSLPSSGEGVFMAAGVQDIISFDHNIKLLTDNGYYN EDYIFNDIVPALIAETSTFLAAGSDGKDGVIMILRKVDSGGLIWDYLHNVDELPEIPSNLAGFDAIVWFNDRLVATGVNK SGREVIINLHYNGDSWEWQDVYTGSGYVRLNDVVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56569; Mature: 56569
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKKERGLSLIEVMVSLVIFAVIVLAFGSFITSNYKGIQEAGEMTRSAHENKKTVERM CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IASGQVSRGHSLELDFGEDNIVIDGGIAESGKLRTFIPTVPAIVSVTSDPEFHVMGEGPV HHCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEECCCCCEEEEECCCCCEEEECCCCE IIEVVVTTRMVPDDTAVEVELRTPDDILVDTAVGQIQDNQDTLYLNAGEHLSDGIYNIVT EEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEECCCCEEEEECCCCHHHHHHHHHH RVDGIWSPFVINYVIRPIVYVVVGEDSTVLCSNDGENWTDHSEELPVDGVDLNAIIWGGR HHCCCCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC PDDRKFIIVGDDGYIFTSEDGVNWQEEITPTGSDLYDICWAKERYLAVGEGGIILTSDSG CCCCEEEEECCCCEEEECCCCCCHHHHCCCCCCCHHHHHCCCCEEEEEECCCEEEECCCC TDWNKISFDDNVNLYGVTYGGTSEDSFSVAVPEATPNYTVVKIEGEDPTKKNLTPSDNLY CCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEE SATWGSLPSSGEGVFMAAGVQDIISFDHNIKLLTDNGYYNEDYIFNDIVPALIAETSTFL EEECCCCCCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEE AAGSDGKDGVIMILRKVDSGGLIWDYLHNVDELPEIPSNLAGFDAIVWFNDRLVATGVNK EECCCCCCCEEEEEEEECCCCCHHHHHCCHHHHCCCCCCCCCCEEEEEECCEEEEECCCC SGREVIINLHYNGDSWEWQDVYTGSGYVRLNDVVAR CCCEEEEEEEECCCCEEEEEEECCCCEEEECCCCCC >Mature Secondary Structure MKLLKKERGLSLIEVMVSLVIFAVIVLAFGSFITSNYKGIQEAGEMTRSAHENKKTVERM CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IASGQVSRGHSLELDFGEDNIVIDGGIAESGKLRTFIPTVPAIVSVTSDPEFHVMGEGPV HHCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEECCCCCEEEEECCCCCEEEECCCCE IIEVVVTTRMVPDDTAVEVELRTPDDILVDTAVGQIQDNQDTLYLNAGEHLSDGIYNIVT EEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEECCCCEEEEECCCCHHHHHHHHHH RVDGIWSPFVINYVIRPIVYVVVGEDSTVLCSNDGENWTDHSEELPVDGVDLNAIIWGGR HHCCCCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC PDDRKFIIVGDDGYIFTSEDGVNWQEEITPTGSDLYDICWAKERYLAVGEGGIILTSDSG CCCCEEEEECCCCEEEECCCCCCHHHHCCCCCCCHHHHHCCCCEEEEEECCCEEEECCCC TDWNKISFDDNVNLYGVTYGGTSEDSFSVAVPEATPNYTVVKIEGEDPTKKNLTPSDNLY CCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEE SATWGSLPSSGEGVFMAAGVQDIISFDHNIKLLTDNGYYNEDYIFNDIVPALIAETSTFL EEECCCCCCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEE AAGSDGKDGVIMILRKVDSGGLIWDYLHNVDELPEIPSNLAGFDAIVWFNDRLVATGVNK EECCCCCCCEEEEEEEECCCCCHHHHHCCHHHHCCCCCCCCCCEEEEEECCEEEEECCCC SGREVIINLHYNGDSWEWQDVYTGSGYVRLNDVVAR CCCEEEEEEEECCCCEEEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA