| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is korA [H]
Identifier: 220931373
GI number: 220931373
Start: 575020
End: 576705
Strand: Direct
Name: korA [H]
Synonym: Hore_05280
Alternate gene names: 220931373
Gene position: 575020-576705 (Clockwise)
Preceding gene: 220931372
Following gene: 220931374
Centisome position: 22.3
GC content: 40.15
Gene sequence:
>1686_bases TTGAACCTTAATTTGTTAATCGGAGGGGAAGCCGGTCAGGGTTTGAATACCGTATCCAGGATTCTGGGTAAGACTTTGTT CAGATCAGGTTTTTTTGTTTATAGTTCAAAGGATTATATGTCAAGAATCAGGGGTGGTCATAATTTTATAAGAATAAGGT TTGGAAATGAAGAAATCCTGGGACCGGCTGAAAGGATAGATATTTTAGTAGCTCTAAATTCAGAAACGATAAAACGTCAT TATAATTATTTAAATGACGAAGGGATAATTATATCTGGAAAAAAGGTAGATGTTTATGGAAAATACTTAACGATTGACGC CCGCCAGTTAGCTAAAGATGTTAATTTGAAAGCACTTAACATGGTTTATATCGGGGCTGTCCTCAGGGTACTGGGGTTGG AAACAAAGGTCTGCGAAGGGGTTATAGAGGACTTTTTCGATAATGAAAATATTATAAAAGCTAACATCAAATTGTTAAGA AGGGGGTATGAAGAGAGCCAGCAATTATTTAAAGTTAATATTAGTAAACCAGCCAGGGATAAGTTATTTATAAATGGAAA TCAGGCGATTGGATTAGGTGCGGTTATGGCCGGAGTAAAATTTTATTCAGCATATCCCATGTCTCCTTCAACAGGGATAA TGAGTTACATAGCCGCCAAACAGAAGGAACTGGGAATTGTGGTAGAACAGGCAGAAGATGAGATTGCAGCGATTAATATG GCCCTTGGTGCTTCTTTTGGTGGTATCAGAGCCATGACCGGAACATCCGGGGGCGGGTTTTCCCTGATGGCAGAAACAGT GGGGTTAGCGGGTATAACAGAAACCCCTGTAGTTATTGCCGAAGTACAAAGACCAGGTCCAGCAACCGGGTTACCTACCA GGACAGAACAGGGCGACCTCTTATTTGCTATTAATGTTTCCCAGGGCGAATTTCCCCTTATGGTTATAAGTCCACGTTGT CAGGAAGATGCCTTTTATCAGTCCTTCAGGGCTTTTAATTTAGCCGACAAGTATCAAATTCCGGTAATATTATTAAGTGA CCAGTATCTGGCTGATTCGAGCCGGACTGTTAACGATTTTAATCTTGATAGTTTAAAAATTAAACGATACCTGGTTTCAC CTGCTGAAACAGATAAAAATGAAGGATACCGACGTTATAAGCTTACTGATGATGGTATCTCTCCCCGGGCTTACCCTGGT CAGAATGATGAAGAACTTGTCGTGGTTGACAGTGATGAACATAACGAATGGGGTCATATTATTGAAGATGCTGAGACCAG AAAAGCTATGGTAGAGAAAAGAATGAGAAAGGAAACGAAACTAAAAGAAACAGATCTTTTAGAGCCCCTTTATACCGGGG AAGAAGAGATTGACTATTTGATTATTGGATGGGGTTCTACCTATGGTCCCATCAGAGAAGCCTTATCACTTTTTCGTAAA GATGGAATTAAGGTTGGTTTTCTTTCTTTTTCTGATGTCTGGCCCTTACCACAAAAAAGTTTGAGGAGATGGGCGTCACA GGACATTGAAATGGTAGCTGTAGAAAATAATGCTACTGCCCAGTTTGCCAGGTTAATCAGAAGTGAAACGGGGATTTCAA TTGACCATAAAATCTTGAAATATGATGGTCGCCCCTTTAACGCCCGGGAGATATACCGGTGTTTTATGAAAGAGGTGGTT AAATAA
Upstream 100 bases:
>100_bases AAAATATAATTAACGATTGACAATACAGAAAATTTATAATAAAATGTAAGTATTAATAGAAATCATTATTATTTTCAAAA AGACTAAAGGAGGTCTAGTT
Downstream 100 bases:
>100_bases TGATAGATAATAGTAGGTTTTATGAAACTAAAGAAACTGCCTGGTGCCCCGGTTGTGGTAATTTTGCCCTCAGGAAGTCA CTCGTTAAAGCGTTGAATGA
Product: pyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MNLNLLIGGEAGQGLNTVSRILGKTLFRSGFFVYSSKDYMSRIRGGHNFIRIRFGNEEILGPAERIDILVALNSETIKRH YNYLNDEGIIISGKKVDVYGKYLTIDARQLAKDVNLKALNMVYIGAVLRVLGLETKVCEGVIEDFFDNENIIKANIKLLR RGYEESQQLFKVNISKPARDKLFINGNQAIGLGAVMAGVKFYSAYPMSPSTGIMSYIAAKQKELGIVVEQAEDEIAAINM ALGASFGGIRAMTGTSGGGFSLMAETVGLAGITETPVVIAEVQRPGPATGLPTRTEQGDLLFAINVSQGEFPLMVISPRC QEDAFYQSFRAFNLADKYQIPVILLSDQYLADSSRTVNDFNLDSLKIKRYLVSPAETDKNEGYRRYKLTDDGISPRAYPG QNDEELVVVDSDEHNEWGHIIEDAETRKAMVEKRMRKETKLKETDLLEPLYTGEEEIDYLIIGWGSTYGPIREALSLFRK DGIKVGFLSFSDVWPLPQKSLRRWASQDIEMVAVENNATAQFARLIRSETGISIDHKILKYDGRPFNAREIYRCFMKEVV K
Sequences:
>Translated_561_residues MNLNLLIGGEAGQGLNTVSRILGKTLFRSGFFVYSSKDYMSRIRGGHNFIRIRFGNEEILGPAERIDILVALNSETIKRH YNYLNDEGIIISGKKVDVYGKYLTIDARQLAKDVNLKALNMVYIGAVLRVLGLETKVCEGVIEDFFDNENIIKANIKLLR RGYEESQQLFKVNISKPARDKLFINGNQAIGLGAVMAGVKFYSAYPMSPSTGIMSYIAAKQKELGIVVEQAEDEIAAINM ALGASFGGIRAMTGTSGGGFSLMAETVGLAGITETPVVIAEVQRPGPATGLPTRTEQGDLLFAINVSQGEFPLMVISPRC QEDAFYQSFRAFNLADKYQIPVILLSDQYLADSSRTVNDFNLDSLKIKRYLVSPAETDKNEGYRRYKLTDDGISPRAYPG QNDEELVVVDSDEHNEWGHIIEDAETRKAMVEKRMRKETKLKETDLLEPLYTGEEEIDYLIIGWGSTYGPIREALSLFRK DGIKVGFLSFSDVWPLPQKSLRRWASQDIEMVAVENNATAQFARLIRSETGISIDHKILKYDGRPFNAREIYRCFMKEVV K >Mature_561_residues MNLNLLIGGEAGQGLNTVSRILGKTLFRSGFFVYSSKDYMSRIRGGHNFIRIRFGNEEILGPAERIDILVALNSETIKRH YNYLNDEGIIISGKKVDVYGKYLTIDARQLAKDVNLKALNMVYIGAVLRVLGLETKVCEGVIEDFFDNENIIKANIKLLR RGYEESQQLFKVNISKPARDKLFINGNQAIGLGAVMAGVKFYSAYPMSPSTGIMSYIAAKQKELGIVVEQAEDEIAAINM ALGASFGGIRAMTGTSGGGFSLMAETVGLAGITETPVVIAEVQRPGPATGLPTRTEQGDLLFAINVSQGEFPLMVISPRC QEDAFYQSFRAFNLADKYQIPVILLSDQYLADSSRTVNDFNLDSLKIKRYLVSPAETDKNEGYRRYKLTDDGISPRAYPG QNDEELVVVDSDEHNEWGHIIEDAETRKAMVEKRMRKETKLKETDLLEPLYTGEEEIDYLIIGWGSTYGPIREALSLFRK DGIKVGFLSFSDVWPLPQKSLRRWASQDIEMVAVENNATAQFARLIRSETGISIDHKILKYDGRPFNAREIYRCFMKEVV K
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 62770; Mature: 62770
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNLLIGGEAGQGLNTVSRILGKTLFRSGFFVYSSKDYMSRIRGGHNFIRIRFGNEEIL CCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCCCEEEEEECCCHHC GPAERIDILVALNSETIKRHYNYLNDEGIIISGKKVDVYGKYLTIDARQLAKDVNLKALN CCHHHEEEEEEECCHHHHHHHCCCCCCCEEEECCEEEEEEEEEEEEHHHHHHHCCCCHHH MVYIGAVLRVLGLETKVCEGVIEDFFDNENIIKANIKLLRRGYEESQQLFKVNISKPARD HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHCCEEEEEECCCCCCC KLFINGNQAIGLGAVMAGVKFYSAYPMSPSTGIMSYIAAKQKELGIVVEQAEDEIAAINM EEEECCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEEEEH ALGASFGGIRAMTGTSGGGFSLMAETVGLAGITETPVVIAEVQRPGPATGLPTRTEQGDL HHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE LFAINVSQGEFPLMVISPRCQEDAFYQSFRAFNLADKYQIPVILLSDQYLADSSRTVNDF EEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCC NLDSLKIKRYLVSPAETDKNEGYRRYKLTDDGISPRAYPGQNDEELVVVDSDEHNEWGHI CCCCEEEEHEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH IEDAETRKAMVEKRMRKETKLKETDLLEPLYTGEEEIDYLIIGWGSTYGPIREALSLFRK HCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH DGIKVGFLSFSDVWPLPQKSLRRWASQDIEMVAVENNATAQFARLIRSETGISIDHKILK CCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEE YDGRPFNAREIYRCFMKEVVK ECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNLNLLIGGEAGQGLNTVSRILGKTLFRSGFFVYSSKDYMSRIRGGHNFIRIRFGNEEIL CCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCCCEEEEEECCCHHC GPAERIDILVALNSETIKRHYNYLNDEGIIISGKKVDVYGKYLTIDARQLAKDVNLKALN CCHHHEEEEEEECCHHHHHHHCCCCCCCEEEECCEEEEEEEEEEEEHHHHHHHCCCCHHH MVYIGAVLRVLGLETKVCEGVIEDFFDNENIIKANIKLLRRGYEESQQLFKVNISKPARD HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHCCEEEEEECCCCCCC KLFINGNQAIGLGAVMAGVKFYSAYPMSPSTGIMSYIAAKQKELGIVVEQAEDEIAAINM EEEECCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEEEEH ALGASFGGIRAMTGTSGGGFSLMAETVGLAGITETPVVIAEVQRPGPATGLPTRTEQGDL HHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE LFAINVSQGEFPLMVISPRCQEDAFYQSFRAFNLADKYQIPVILLSDQYLADSSRTVNDF EEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCC NLDSLKIKRYLVSPAETDKNEGYRRYKLTDDGISPRAYPGQNDEELVVVDSDEHNEWGHI CCCCEEEEHEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH IEDAETRKAMVEKRMRKETKLKETDLLEPLYTGEEEIDYLIIGWGSTYGPIREALSLFRK HCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH DGIKVGFLSFSDVWPLPQKSLRRWASQDIEMVAVENNATAQFARLIRSETGISIDHKILK CCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEE YDGRPFNAREIYRCFMKEVVK ECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]