| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931372
Identifier: 220931372
GI number: 220931372
Start: 574015
End: 574803
Strand: Direct
Name: 220931372
Synonym: Hore_05270
Alternate gene names: NA
Gene position: 574015-574803 (Clockwise)
Preceding gene: 220931370
Following gene: 220931373
Centisome position: 22.26
GC content: 33.46
Gene sequence:
>789_bases TTGAAAAGTGATGATATTTTTCAGGAAAGAATAAATTTGATATTCTGGTTACGTATTTTTAAAGAACATGCCTTATTTAT TAAAAAGGGATTAACCTATGATGAAGATGAGTTAATTGCCAGGGCCCATGACTTTTATAATTTGTTCGATAAACTCCAGA ACAGGGCCAGAAGAATAATGGGGACTCCACCAGGACATAATTCTGAATTAATTGAAGAAAGTATAAATGCTGTTGGGGAA TTACTTGAATTTAAAAAAACACTTTTAAGATTAATTGTTCAGTGTGAGTCTACCTTTAATCTCTATCCACTTTTGATAAC ACACACTGTCAGAGAGGCAGATGAATTTTTAGAAATTGTTTCAGAATACCAGGGACAGAAAAAACAAATATCCCTTCCCC GGGATTTACTCGGTGATGTTACCTTCTGGTTGAGGGGGATGAAGGAACACACAGCTTTCTTACATCATTTAATAGATCCT TCAGAGAGGATATTACTGGACAAATTGAGGGATTATAATCAGAGATTTAATTATTTGTTTGTACGTGCACTGGATCTGGA ATCTATGCTTAAGTCAGAGCCTGATAATTTTCCGGCAGTTTCTAATTTTATCCTCGAATTAATATTAAATTTAAAGGACT TAAATCAATTTCAGGATAGAGTTAAAACATTACTGGCTGATTGTAAACTATTATCAATTACTGGTCCGCTCTTTGCCAAC CATCTTATCAGGGAGACAGAATACTTTGAGAATCTTATTAACCAGATGAAAGCCTATTTTAAATTATAA
Upstream 100 bases:
>100_bases TGGTAATATCCATAAATAATAAGCATATCTTTACTAAGGAGAGAGAAAACAGTTTATAATTATTTTAATTAAGATTTATA AGGAAGGAGAGGATAAATAT
Downstream 100 bases:
>100_bases AAAATAGTCAAAGATAATTTTAAAGTTATAAATTAACAAATGAGCCGGGTGCAGACCGGCTTTTTATCATTTTAAATATA AATAAGGTAAAATTGTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIMGTPPGHNSELIEESINAVGE LLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIVSEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDP SERILLDKLRDYNQRFNYLFVRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN HLIRETEYFENLINQMKAYFKL
Sequences:
>Translated_262_residues MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIMGTPPGHNSELIEESINAVGE LLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIVSEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDP SERILLDKLRDYNQRFNYLFVRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN HLIRETEYFENLINQMKAYFKL >Mature_262_residues MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIMGTPPGHNSELIEESINAVGE LLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIVSEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDP SERILLDKLRDYNQRFNYLFVRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN HLIRETEYFENLINQMKAYFKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30998; Mature: 30998
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GTPPGHNSELIEESINAVGELLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDPSERILLDKLRDYNQRFNYLF HHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLIRETEYFENLINQMKAYFKL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GTPPGHNSELIEESINAVGELLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDPSERILLDKLRDYNQRFNYLF HHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLIRETEYFENLINQMKAYFKL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA