Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931372

Identifier: 220931372

GI number: 220931372

Start: 574015

End: 574803

Strand: Direct

Name: 220931372

Synonym: Hore_05270

Alternate gene names: NA

Gene position: 574015-574803 (Clockwise)

Preceding gene: 220931370

Following gene: 220931373

Centisome position: 22.26

GC content: 33.46

Gene sequence:

>789_bases
TTGAAAAGTGATGATATTTTTCAGGAAAGAATAAATTTGATATTCTGGTTACGTATTTTTAAAGAACATGCCTTATTTAT
TAAAAAGGGATTAACCTATGATGAAGATGAGTTAATTGCCAGGGCCCATGACTTTTATAATTTGTTCGATAAACTCCAGA
ACAGGGCCAGAAGAATAATGGGGACTCCACCAGGACATAATTCTGAATTAATTGAAGAAAGTATAAATGCTGTTGGGGAA
TTACTTGAATTTAAAAAAACACTTTTAAGATTAATTGTTCAGTGTGAGTCTACCTTTAATCTCTATCCACTTTTGATAAC
ACACACTGTCAGAGAGGCAGATGAATTTTTAGAAATTGTTTCAGAATACCAGGGACAGAAAAAACAAATATCCCTTCCCC
GGGATTTACTCGGTGATGTTACCTTCTGGTTGAGGGGGATGAAGGAACACACAGCTTTCTTACATCATTTAATAGATCCT
TCAGAGAGGATATTACTGGACAAATTGAGGGATTATAATCAGAGATTTAATTATTTGTTTGTACGTGCACTGGATCTGGA
ATCTATGCTTAAGTCAGAGCCTGATAATTTTCCGGCAGTTTCTAATTTTATCCTCGAATTAATATTAAATTTAAAGGACT
TAAATCAATTTCAGGATAGAGTTAAAACATTACTGGCTGATTGTAAACTATTATCAATTACTGGTCCGCTCTTTGCCAAC
CATCTTATCAGGGAGACAGAATACTTTGAGAATCTTATTAACCAGATGAAAGCCTATTTTAAATTATAA

Upstream 100 bases:

>100_bases
TGGTAATATCCATAAATAATAAGCATATCTTTACTAAGGAGAGAGAAAACAGTTTATAATTATTTTAATTAAGATTTATA
AGGAAGGAGAGGATAAATAT

Downstream 100 bases:

>100_bases
AAAATAGTCAAAGATAATTTTAAAGTTATAAATTAACAAATGAGCCGGGTGCAGACCGGCTTTTTATCATTTTAAATATA
AATAAGGTAAAATTGTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIMGTPPGHNSELIEESINAVGE
LLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIVSEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDP
SERILLDKLRDYNQRFNYLFVRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN
HLIRETEYFENLINQMKAYFKL

Sequences:

>Translated_262_residues
MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIMGTPPGHNSELIEESINAVGE
LLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIVSEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDP
SERILLDKLRDYNQRFNYLFVRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN
HLIRETEYFENLINQMKAYFKL
>Mature_262_residues
MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIMGTPPGHNSELIEESINAVGE
LLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIVSEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDP
SERILLDKLRDYNQRFNYLFVRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN
HLIRETEYFENLINQMKAYFKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30998; Mature: 30998

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GTPPGHNSELIEESINAVGELLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDPSERILLDKLRDYNQRFNYLF
HHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLIRETEYFENLINQMKAYFKL
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSDDIFQERINLIFWLRIFKEHALFIKKGLTYDEDELIARAHDFYNLFDKLQNRARRIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GTPPGHNSELIEESINAVGELLEFKKTLLRLIVQCESTFNLYPLLITHTVREADEFLEIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SEYQGQKKQISLPRDLLGDVTFWLRGMKEHTAFLHHLIDPSERILLDKLRDYNQRFNYLF
HHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VRALDLESMLKSEPDNFPAVSNFILELILNLKDLNQFQDRVKTLLADCKLLSITGPLFAN
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLIRETEYFENLINQMKAYFKL
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA