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The map label for this gene is korB [H]

Identifier: 220931374

GI number: 220931374

Start: 576705

End: 577559

Strand: Direct

Name: korB [H]

Synonym: Hore_05290

Alternate gene names: 220931374

Gene position: 576705-577559 (Clockwise)

Preceding gene: 220931373

Following gene: 220931375

Centisome position: 22.37

GC content: 40.58

Gene sequence:

>855_bases
ATGATAGATAATAGTAGGTTTTATGAAACTAAAGAAACTGCCTGGTGCCCCGGTTGTGGTAATTTTGCCCTCAGGAAGTC
ACTCGTTAAAGCGTTGAATGAATTAAAGCTTAAACCACATCAGGTAGTGATGTTTACCGGAATTGGGCAGGCAGCTAAAA
TGCCCCATTATATTAATGTTAATACCTTCAATGGCCTCCATGGTAGGTCCTTACCACCGGCAATAGGTATGAGAGTAGCC
AACCACACGTTAACAGTAATTGTAGAGTCAGGGGATGGGTGTTCCTATGGTGAAGGGGGGAATCATTTTATTCATAATAT
CAGAAGAAATCCTGATATAATTCACCTTGTCCACGATAATCAAATTTATGGATTAACTAAAGGTCAGGCCTCACCGACGA
CTGGAATGGGTATGAAAACCAGGGTTCAGACTGATGGGGTTAAGTCAGAACCCCTCAACCCATTAAGTATGGCCCTTGGA
ATGGGGGTAGGTTTCGTGGCCAGGGGCTTTGTTGGCGAAGGTGATCATTTAAAAGAACTAATAAAGTCTGCCTTTGATTA
TAAGGGTTATGCTTTAATTGATATTCTACAACCCTGTGTCTCTTTTAATAAAATAAATACCTTTAAATGGTACCGGGAGA
GGGTATATAAACTGGATGAAAACTATGATGAAACCGACCTGGAACTTGCCTTTAAAAAAGCAAGGGAATGGGAAGATAGG
ATACCGATTGGAATTATATATCGGGCCGAAAAGGTAACATTCAGGGAAAGGTATGGTTATCTCGAAGATAGTCCCCTGGT
TAATGAAGTTGGTAAGCCATCTGAAATGTCCTTTTTGCTTGATGATTTTAGATGA

Upstream 100 bases:

>100_bases
AAACGGGGATTTCAATTGACCATAAAATCTTGAAATATGATGGTCGCCCCTTTAACGCCCGGGAGATATACCGGTGTTTT
ATGAAAGAGGTGGTTAAATA

Downstream 100 bases:

>100_bases
TATTGCAAAGAAAAAAGCATTGTTCAGCTTATGACTATAAAAGTTTAGTTACCCATTAAATTATGAATTTAAAAAAGAAG
GAGGTATAATATGTCTGTTT

Product: pyruvate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIDNSRFYETKETAWCPGCGNFALRKSLVKALNELKLKPHQVVMFTGIGQAAKMPHYINVNTFNGLHGRSLPPAIGMRVA
NHTLTVIVESGDGCSYGEGGNHFIHNIRRNPDIIHLVHDNQIYGLTKGQASPTTGMGMKTRVQTDGVKSEPLNPLSMALG
MGVGFVARGFVGEGDHLKELIKSAFDYKGYALIDILQPCVSFNKINTFKWYRERVYKLDENYDETDLELAFKKAREWEDR
IPIGIIYRAEKVTFRERYGYLEDSPLVNEVGKPSEMSFLLDDFR

Sequences:

>Translated_284_residues
MIDNSRFYETKETAWCPGCGNFALRKSLVKALNELKLKPHQVVMFTGIGQAAKMPHYINVNTFNGLHGRSLPPAIGMRVA
NHTLTVIVESGDGCSYGEGGNHFIHNIRRNPDIIHLVHDNQIYGLTKGQASPTTGMGMKTRVQTDGVKSEPLNPLSMALG
MGVGFVARGFVGEGDHLKELIKSAFDYKGYALIDILQPCVSFNKINTFKWYRERVYKLDENYDETDLELAFKKAREWEDR
IPIGIIYRAEKVTFRERYGYLEDSPLVNEVGKPSEMSFLLDDFR
>Mature_284_residues
MIDNSRFYETKETAWCPGCGNFALRKSLVKALNELKLKPHQVVMFTGIGQAAKMPHYINVNTFNGLHGRSLPPAIGMRVA
NHTLTVIVESGDGCSYGEGGNHFIHNIRRNPDIIHLVHDNQIYGLTKGQASPTTGMGMKTRVQTDGVKSEPLNPLSMALG
MGVGFVARGFVGEGDHLKELIKSAFDYKGYALIDILQPCVSFNKINTFKWYRERVYKLDENYDETDLELAFKKAREWEDR
IPIGIIYRAEKVTFRERYGYLEDSPLVNEVGKPSEMSFLLDDFR

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 32085; Mature: 32085

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNSRFYETKETAWCPGCGNFALRKSLVKALNELKLKPHQVVMFTGIGQAAKMPHYINV
CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCEEEEE
NTFNGLHGRSLPPAIGMRVANHTLTVIVESGDGCSYGEGGNHFIHNIRRNPDIIHLVHDN
ECCCCCCCCCCCHHHHHEEECCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEECC
QIYGLTKGQASPTTGMGMKTRVQTDGVKSEPLNPLSMALGMGVGFVARGFVGEGDHLKEL
EEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCHHHHHH
IKSAFDYKGYALIDILQPCVSFNKINTFKWYRERVYKLDENYDETDLELAFKKAREWEDR
HHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
IPIGIIYRAEKVTFRERYGYLEDSPLVNEVGKPSEMSFLLDDFR
CCEEEEEECCHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MIDNSRFYETKETAWCPGCGNFALRKSLVKALNELKLKPHQVVMFTGIGQAAKMPHYINV
CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCEEEEE
NTFNGLHGRSLPPAIGMRVANHTLTVIVESGDGCSYGEGGNHFIHNIRRNPDIIHLVHDN
ECCCCCCCCCCCHHHHHEEECCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEECC
QIYGLTKGQASPTTGMGMKTRVQTDGVKSEPLNPLSMALGMGVGFVARGFVGEGDHLKEL
EEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCHHHHHH
IKSAFDYKGYALIDILQPCVSFNKINTFKWYRERVYKLDENYDETDLELAFKKAREWEDR
HHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
IPIGIIYRAEKVTFRERYGYLEDSPLVNEVGKPSEMSFLLDDFR
CCEEEEEECCHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]