| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931360
Identifier: 220931360
GI number: 220931360
Start: 562259
End: 562657
Strand: Reverse
Name: 220931360
Synonym: Hore_05150
Alternate gene names: NA
Gene position: 562657-562259 (Counterclockwise)
Preceding gene: 220931361
Following gene: 220931359
Centisome position: 21.82
GC content: 34.59
Gene sequence:
>399_bases ATGGTTCAATTAAGGGGACACCATTTATTATGTGTCCAGTTTTTTCAGGGTCTGGGTTATAGTAAGGAGTTTATTCAAAA AATGTATGAATTATTAAAGAAGATTGAAGAGCCTTCAACACGGATATTACTTACAACTTCCTGTGACTACCTATGCCAGG CCTGCCCCTGGCATAATGAATATACCTGTACAATTTCATCCCCTTCAGAAGAATTAAAACTGGTTGAAAGGGATAAAGCT GTATTATCTTATTTTGGTTTTGAAGAACACCAGCTAATAACAGCAGGTTTATATAAAAAGAGGGTTGATTTATTATTGCC AAAACTGGATTTAAAAAAAATCTGTGGTAATTGTCGCTGGTTTGAAATCTGTAATTCAAAACGAGGTCAGGTAGATTAA
Upstream 100 bases:
>100_bases GGTGATCTTTTTAAAATCTTTATAGTAACACTGATATCCCAAAAAGGATTAATCTCTGCCTTCAGGACTAATAGGTAAAA TGAAATAAAAGGGGGTAAAT
Downstream 100 bases:
>100_bases CATCTCCCTGGCCTTTTTAGTTTATTAGGAATTTTTAGCGACCCTCAGTCTTCCATTTAAATACATATTACCCAATATTT ACTTCAGTTAACCTGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MVQLRGHHLLCVQFFQGLGYSKEFIQKMYELLKKIEEPSTRILLTTSCDYLCQACPWHNEYTCTISSPSEELKLVERDKA VLSYFGFEEHQLITAGLYKKRVDLLLPKLDLKKICGNCRWFEICNSKRGQVD
Sequences:
>Translated_132_residues MVQLRGHHLLCVQFFQGLGYSKEFIQKMYELLKKIEEPSTRILLTTSCDYLCQACPWHNEYTCTISSPSEELKLVERDKA VLSYFGFEEHQLITAGLYKKRVDLLLPKLDLKKICGNCRWFEICNSKRGQVD >Mature_132_residues MVQLRGHHLLCVQFFQGLGYSKEFIQKMYELLKKIEEPSTRILLTTSCDYLCQACPWHNEYTCTISSPSEELKLVERDKA VLSYFGFEEHQLITAGLYKKRVDLLLPKLDLKKICGNCRWFEICNSKRGQVD
Specific function: Unknown
COG id: COG3543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15440; Mature: 15440
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQLRGHHLLCVQFFQGLGYSKEFIQKMYELLKKIEEPSTRILLTTSCDYLCQACPWHNE CEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCC YTCTISSPSEELKLVERDKAVLSYFGFEEHQLITAGLYKKRVDLLLPKLDLKKICGNCRW EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEE FEICNSKRGQVD EEECCCCCCCCC >Mature Secondary Structure MVQLRGHHLLCVQFFQGLGYSKEFIQKMYELLKKIEEPSTRILLTTSCDYLCQACPWHNE CEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCC YTCTISSPSEELKLVERDKAVLSYFGFEEHQLITAGLYKKRVDLLLPKLDLKKICGNCRW EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEE FEICNSKRGQVD EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA