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The map label for this gene is ykwD [H]

Identifier: 220931359

GI number: 220931359

Start: 561302

End: 562078

Strand: Reverse

Name: ykwD [H]

Synonym: Hore_05140

Alternate gene names: 220931359

Gene position: 562078-561302 (Counterclockwise)

Preceding gene: 220931360

Following gene: 220931357

Centisome position: 21.8

GC content: 43.5

Gene sequence:

>777_bases
ATGAGAAAATTAAAAATCCTTATTCCTTTAATTCTGGCAGTGTTACTTGTCTCCTGTGCCAATGAGTCCCCTACCCAGGA
ATCTTCAATATTTCAGATTGGTGAAGTTGAATACTGCAGGGTTACAGATGACAATGTTAATGTTAAAGCCGGGGCTGGTA
ACACCTTCCCCAATATTGCTACCCTGAATAAAGGTGATATAGTAAAGGTTATGGGGGAAATGGGGAACTGGTATGTAGTC
AGACTCGACAATAACCAGGTCGGGTGTATTAATACCACAGATGCCACTCCTGTTGTCAGAGATGGCGGTGAACCGGAAAA
ACAACGGCGAATTGTCGAACCAGAACCCGCTCCTGAAGCCAAAGACGATGTCGCCCCGGCAAAAAGCCTTACTTCCATGG
AACAACGAATGGTAAATCTTATTAACCAGGAACGGCGTAAGAATAACCTTAAGCCCCTGGAAGTCCATATGAAATTAACA
GAGGTAGCCCGGATAAAATCCCAGGACATGGTTGACAATAATTACTTTAGCCATTATTCGCCAACCTATGGCAGCCCCTT
TGATATGATGGACAGATTTGGGATTGAATACTTACACGCTGCTGAAAACATTGCTGCCAATCGCTCCGTAGATGATGCCC
ATGAATCACTTATGAGGTCAAGCGGGCACCGCAGAAATATCCTTAATCCCAACTTCACCCATGTTGGGGTTGGTATAAAA
CCAAGTGATAAGTATGGTTATATATTTACCCAGATGTTTATAAGCCGTCCTCAGTAA

Upstream 100 bases:

>100_bases
ACTTCAGTTAACCTGGTGTAATCTTGATTTATATTAATATTTTTTTACAATTTACAAATAATAGAATTATATAAAATATT
AAATACTGGAGGAATCAAAT

Downstream 100 bases:

>100_bases
TGAAGGCCAAGTGTAACCTTACACCACCGTTAATATTAATTCTCTCCTGGCACTTTTTTAAAAAAGCAACTACGGTTTAT
AATAATAAACACAATTCTAA

Product: SCP-like extracellular

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRKLKILIPLILAVLLVSCANESPTQESSIFQIGEVEYCRVTDDNVNVKAGAGNTFPNIATLNKGDIVKVMGEMGNWYVV
RLDNNQVGCINTTDATPVVRDGGEPEKQRRIVEPEPAPEAKDDVAPAKSLTSMEQRMVNLINQERRKNNLKPLEVHMKLT
EVARIKSQDMVDNNYFSHYSPTYGSPFDMMDRFGIEYLHAAENIAANRSVDDAHESLMRSSGHRRNILNPNFTHVGVGIK
PSDKYGYIFTQMFISRPQ

Sequences:

>Translated_258_residues
MRKLKILIPLILAVLLVSCANESPTQESSIFQIGEVEYCRVTDDNVNVKAGAGNTFPNIATLNKGDIVKVMGEMGNWYVV
RLDNNQVGCINTTDATPVVRDGGEPEKQRRIVEPEPAPEAKDDVAPAKSLTSMEQRMVNLINQERRKNNLKPLEVHMKLT
EVARIKSQDMVDNNYFSHYSPTYGSPFDMMDRFGIEYLHAAENIAANRSVDDAHESLMRSSGHRRNILNPNFTHVGVGIK
PSDKYGYIFTQMFISRPQ
>Mature_258_residues
MRKLKILIPLILAVLLVSCANESPTQESSIFQIGEVEYCRVTDDNVNVKAGAGNTFPNIATLNKGDIVKVMGEMGNWYVV
RLDNNQVGCINTTDATPVVRDGGEPEKQRRIVEPEPAPEAKDDVAPAKSLTSMEQRMVNLINQERRKNNLKPLEVHMKLT
EVARIKSQDMVDNNYFSHYSPTYGSPFDMMDRFGIEYLHAAENIAANRSVDDAHESLMRSSGHRRNILNPNFTHVGVGIK
PSDKYGYIFTQMFISRPQ

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 28998; Mature: 28998

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKILIPLILAVLLVSCANESPTQESSIFQIGEVEYCRVTDDNVNVKAGAGNTFPNIA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEECCCCCCCCEE
TLNKGDIVKVMGEMGNWYVVRLDNNQVGCINTTDATPVVRDGGEPEKQRRIVEPEPAPEA
ECCCCCHHHEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCC
KDDVAPAKSLTSMEQRMVNLINQERRKNNLKPLEVHMKLTEVARIKSQDMVDNNYFSHYS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCC
PTYGSPFDMMDRFGIEYLHAAENIAANRSVDDAHESLMRSSGHRRNILNPNFTHVGVGIK
CCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCC
PSDKYGYIFTQMFISRPQ
CCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRKLKILIPLILAVLLVSCANESPTQESSIFQIGEVEYCRVTDDNVNVKAGAGNTFPNIA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEECCCCCCCCEE
TLNKGDIVKVMGEMGNWYVVRLDNNQVGCINTTDATPVVRDGGEPEKQRRIVEPEPAPEA
ECCCCCHHHEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCC
KDDVAPAKSLTSMEQRMVNLINQERRKNNLKPLEVHMKLTEVARIKSQDMVDNNYFSHYS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCC
PTYGSPFDMMDRFGIEYLHAAENIAANRSVDDAHESLMRSSGHRRNILNPNFTHVGVGIK
CCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCC
PSDKYGYIFTQMFISRPQ
CCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]