Click here to switch to the map view.

The map label for this gene is bioY [H]

Identifier: 220931361

GI number: 220931361

Start: 562680

End: 563234

Strand: Reverse

Name: bioY [H]

Synonym: Hore_05160

Alternate gene names: 220931361

Gene position: 563234-562680 (Counterclockwise)

Preceding gene: 220931366

Following gene: 220931360

Centisome position: 21.85

GC content: 41.98

Gene sequence:

>555_bases
ATGTCAGGTTATAAACTCAGTATCCACGATTTAACCAGGATAGCCTTTTTTGCAGCCCTGACCGGGATTCTGGCCTATAT
ATCCTTTCCCCTTCCTTTCAGCCCGGTACCTGTCAGTGGGCAAACCCTTGGTGTTATGTTAGCCGGCCTGCTGCTTGGGA
GTTACCGGGGGTTTTTAAGCCAGATTGCTTATATTTTACTGGGAGTAATCGGACTCCCAGTATTTGCAGGAGGATCCTCG
GGAATAGGTAGCCTTTTTGGTCCCAGTGGTGGCTATATCTGGGGTTTTCTCTTTGGTGCCTATATCATCGGAAGGCTTTT
TGAAAGTTTTAATAACAGTAATTATATTGTTAAGTTTTTCTTTCTAGTAACAGGAGGAATCGTGGTTGTCTACTTATTCG
GGATAACCCAACTTATTATTGTCACCAAAATGTCTTTAACCGAAGCAATTGTGTCCGGAATGCTACCCTTTTTACCGGGT
GATCTTTTTAAAATCTTTATAGTAACACTGATATCCCAAAAAGGATTAATCTCTGCCTTCAGGACTAATAGGTAA

Upstream 100 bases:

>100_bases
TTATTGTTAACCTGTTTTAATTTATGGTTGACAATTATATCAATATAAGTCATAATATTAATCAGGACGGCTATATATTG
CAAATGATAGGAGGATTATT

Downstream 100 bases:

>100_bases
AATGAAATAAAAGGGGGTAAATATGGTTCAATTAAGGGGACACCATTTATTATGTGTCCAGTTTTTTCAGGGTCTGGGTT
ATAGTAAGGAGTTTATTCAA

Product: BioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSGYKLSIHDLTRIAFFAALTGILAYISFPLPFSPVPVSGQTLGVMLAGLLLGSYRGFLSQIAYILLGVIGLPVFAGGSS
GIGSLFGPSGGYIWGFLFGAYIIGRLFESFNNSNYIVKFFFLVTGGIVVVYLFGITQLIIVTKMSLTEAIVSGMLPFLPG
DLFKIFIVTLISQKGLISAFRTNR

Sequences:

>Translated_184_residues
MSGYKLSIHDLTRIAFFAALTGILAYISFPLPFSPVPVSGQTLGVMLAGLLLGSYRGFLSQIAYILLGVIGLPVFAGGSS
GIGSLFGPSGGYIWGFLFGAYIIGRLFESFNNSNYIVKFFFLVTGGIVVVYLFGITQLIIVTKMSLTEAIVSGMLPFLPG
DLFKIFIVTLISQKGLISAFRTNR
>Mature_183_residues
SGYKLSIHDLTRIAFFAALTGILAYISFPLPFSPVPVSGQTLGVMLAGLLLGSYRGFLSQIAYILLGVIGLPVFAGGSSG
IGSLFGPSGGYIWGFLFGAYIIGRLFESFNNSNYIVKFFFLVTGGIVVVYLFGITQLIIVTKMSLTEAIVSGMLPFLPGD
LFKIFIVTLISQKGLISAFRTNR

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19759; Mature: 19628

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYKLSIHDLTRIAFFAALTGILAYISFPLPFSPVPVSGQTLGVMLAGLLLGSYRGFLS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QIAYILLGVIGLPVFAGGSSGIGSLFGPSGGYIWGFLFGAYIIGRLFESFNNSNYIVKFF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FLVTGGIVVVYLFGITQLIIVTKMSLTEAIVSGMLPFLPGDLFKIFIVTLISQKGLISAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
RTNR
HCCC
>Mature Secondary Structure 
SGYKLSIHDLTRIAFFAALTGILAYISFPLPFSPVPVSGQTLGVMLAGLLLGSYRGFLS
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QIAYILLGVIGLPVFAGGSSGIGSLFGPSGGYIWGFLFGAYIIGRLFESFNNSNYIVKFF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FLVTGGIVVVYLFGITQLIIVTKMSLTEAIVSGMLPFLPGDLFKIFIVTLISQKGLISAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
RTNR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]