| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is bglIIM [H]
Identifier: 220931356
GI number: 220931356
Start: 557074
End: 558234
Strand: Reverse
Name: bglIIM [H]
Synonym: Hore_05110
Alternate gene names: 220931356
Gene position: 558234-557074 (Counterclockwise)
Preceding gene: 220931357
Following gene: 220931354
Centisome position: 21.65
GC content: 34.45
Gene sequence:
>1161_bases ATGAATGACAGTAGTACCTGTAATGACAATAATATTAACAATTATAAAATAATCAGGTTAAAACATAAATCTAATTTGCA CTCTTCAGAAATTAAAGCCATTGACTATATAAATAAATTCTTTAACCAGGATAACTTCTACATTGAGGTAAATCCCGGCT CCGTAAAGATTTATTTAAAAAAACTCGACATGAAAAAGCTGGGTCGGTTAATTAAAGAAATAAACGATACCAGTCCTTTT CTTCTCAAAATATACCGTACTATAAAAAATATAAAAAGCTATGTCATTGAAAATAACAAAAGGGTTTATGTAGACTATAA CAGAGAAAAAAAAGTTAAAAACAGAAAGAAAAAGGAAAGAAACAGGCAAAAATATTTTTATGCCAGAAATCATAATTTTA ATGTCATTAATCAACCATTACCTGAAAAATATATAAATAAAATTATCTGTGGTGACAGTGAACAAATACTTAAAGAAATA CCTGATAACAGTATAGATCTCATTCTTACTTCCCCGCCATATAACTTTGGACTTGATTACAAAGATTCACGGGATGGCTA TTACTGGAAAAGTTATTTTAGTAAGTTGTTTTCCATTTTTAAGGAATGTATCAGAATTCTCAAATATGGCGGCCGGATAA TCATCAACGTCCAGCCCCTCTTTTCAGATTATATCCCCACCCACCACCTGATCAGCAACTTTTTTATAAAAAATAAGATG ATCTGGAAGGGAGAAATCCTCTGGGAAAAAAATAACTACAACTGCAAATATACAGCCTGGGGTAGCTGGAAAAGCCCCTC AAGTCCTTATTTAAAATACACCTGGGAGTTTTTAGAGATCTTTGCAAAGGGTAGTTTAAAGAAAAAAGGAGATAAAAAAA ATATTGATATTACAGGAGAGGAATTTAAAGAATGGGTTTCGGCCAGGTGGTCGATTGCCCCGGTCCGTAATATGAAAAAA TACCAGCACCCGGCAGTATTCCCCGAGGAACTGGTTTATAGAGTCCTGAAGTTATTCAGTTATAAGGGTGACGTTATCCT CGATCCCTTTAACGGAACAGGAACCACTACAGCAGTCGCCCACAGACTTAAAAGGAATTATCTGGGGATTGATATCTCAC CTGATTACTGTAATACAGCCCGTGGCCGTCTTAATCCATAG
Upstream 100 bases:
>100_bases AACTTAAACTTATCACATAAAAATGTATTGACTGAGTTCTCAGATGAAATAATACCTGAAGATAAATTAAATGGGAAGGA AGATAGCGGGGGGAAAAACA
Downstream 100 bases:
>100_bases CCATCTTTAAACGACCATCCTGAAACCAGTTATAAAACTCAGACAGGATTTGATCTGGCTTCCAGGATAAGGTCAATAAC TTCACGGACAGCCCCGCGGC
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.BglII; N(4)- cytosine-specific methyltransferase BglII [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNDSSTCNDNNINNYKIIRLKHKSNLHSSEIKAIDYINKFFNQDNFYIEVNPGSVKIYLKKLDMKKLGRLIKEINDTSPF LLKIYRTIKNIKSYVIENNKRVYVDYNREKKVKNRKKKERNRQKYFYARNHNFNVINQPLPEKYINKIICGDSEQILKEI PDNSIDLILTSPPYNFGLDYKDSRDGYYWKSYFSKLFSIFKECIRILKYGGRIIINVQPLFSDYIPTHHLISNFFIKNKM IWKGEILWEKNNYNCKYTAWGSWKSPSSPYLKYTWEFLEIFAKGSLKKKGDKKNIDITGEEFKEWVSARWSIAPVRNMKK YQHPAVFPEELVYRVLKLFSYKGDVILDPFNGTGTTTAVAHRLKRNYLGIDISPDYCNTARGRLNP
Sequences:
>Translated_386_residues MNDSSTCNDNNINNYKIIRLKHKSNLHSSEIKAIDYINKFFNQDNFYIEVNPGSVKIYLKKLDMKKLGRLIKEINDTSPF LLKIYRTIKNIKSYVIENNKRVYVDYNREKKVKNRKKKERNRQKYFYARNHNFNVINQPLPEKYINKIICGDSEQILKEI PDNSIDLILTSPPYNFGLDYKDSRDGYYWKSYFSKLFSIFKECIRILKYGGRIIINVQPLFSDYIPTHHLISNFFIKNKM IWKGEILWEKNNYNCKYTAWGSWKSPSSPYLKYTWEFLEIFAKGSLKKKGDKKNIDITGEEFKEWVSARWSIAPVRNMKK YQHPAVFPEELVYRVLKLFSYKGDVILDPFNGTGTTTAVAHRLKRNYLGIDISPDYCNTARGRLNP >Mature_386_residues MNDSSTCNDNNINNYKIIRLKHKSNLHSSEIKAIDYINKFFNQDNFYIEVNPGSVKIYLKKLDMKKLGRLIKEINDTSPF LLKIYRTIKNIKSYVIENNKRVYVDYNREKKVKNRKKKERNRQKYFYARNHNFNVINQPLPEKYINKIICGDSEQILKEI PDNSIDLILTSPPYNFGLDYKDSRDGYYWKSYFSKLFSIFKECIRILKYGGRIIINVQPLFSDYIPTHHLISNFFIKNKM IWKGEILWEKNNYNCKYTAWGSWKSPSSPYLKYTWEFLEIFAKGSLKKKGDKKNIDITGEEFKEWVSARWSIAPVRNMKK YQHPAVFPEELVYRVLKLFSYKGDVILDPFNGTGTTTAVAHRLKRNYLGIDISPDYCNTARGRLNP
Specific function: This methylase recognizes the double-stranded sequence AGATCT, causes specific methylation on C-5 on both strands, and protects the DNA from cleavage by the BglII endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=260, Percent_Identity=29.6153846153846, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 45796; Mature: 45796
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSSTCNDNNINNYKIIRLKHKSNLHSSEIKAIDYINKFFNQDNFYIEVNPGSVKIYLK CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEE KLDMKKLGRLIKEINDTSPFLLKIYRTIKNIKSYVIENNKRVYVDYNREKKVKNRKKKER CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHH NRQKYFYARNHNFNVINQPLPEKYINKIICGDSEQILKEIPDNSIDLILTSPPYNFGLDY HHHHEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCC KDSRDGYYWKSYFSKLFSIFKECIRILKYGGRIIINVQPLFSDYIPTHHLISNFFIKNKM CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCHHHHHHHHHHHCEE IWKGEILWEKNNYNCKYTAWGSWKSPSSPYLKYTWEFLEIFAKGSLKKKGDKKNIDITGE EEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH EFKEWVSARWSIAPVRNMKKYQHPAVFPEELVYRVLKLFSYKGDVILDPFNGTGTTTAVA HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH HRLKRNYLGIDISPDYCNTARGRLNP HHHHHHCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNDSSTCNDNNINNYKIIRLKHKSNLHSSEIKAIDYINKFFNQDNFYIEVNPGSVKIYLK CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEE KLDMKKLGRLIKEINDTSPFLLKIYRTIKNIKSYVIENNKRVYVDYNREKKVKNRKKKER CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHH NRQKYFYARNHNFNVINQPLPEKYINKIICGDSEQILKEIPDNSIDLILTSPPYNFGLDY HHHHEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCC KDSRDGYYWKSYFSKLFSIFKECIRILKYGGRIIINVQPLFSDYIPTHHLISNFFIKNKM CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCHHHHHHHHHHHCEE IWKGEILWEKNNYNCKYTAWGSWKSPSSPYLKYTWEFLEIFAKGSLKKKGDKKNIDITGE EEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH EFKEWVSARWSIAPVRNMKKYQHPAVFPEELVYRVLKLFSYKGDVILDPFNGTGTTTAVA HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH HRLKRNYLGIDISPDYCNTARGRLNP HHHHHHCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9073062 [H]