Click here to switch to the map view.

The map label for this gene is 220931354

Identifier: 220931354

GI number: 220931354

Start: 555977

End: 556432

Strand: Reverse

Name: 220931354

Synonym: Hore_05090

Alternate gene names: NA

Gene position: 556432-555977 (Counterclockwise)

Preceding gene: 220931356

Following gene: 220931346

Centisome position: 21.58

GC content: 41.23

Gene sequence:

>456_bases
ATGAATAGTAACTTTGAACCACAACAGGTCTTTAACCCCCCTCTGGAAATAACCCTGGAATTAATCAGTCGGGCTGTTGC
CGGAGAAACCACTGACAGGAGATTTTATCGATACCTATTAAATGCTGCCCCCAATGAAAAGGAAAGGGCGATTATTTCCG
GGATCAGGGAGGATGAATTAAGGCATTATGAACTTTTCCGTCAGATTTACAGGGATATAACCGGTAGAAATCCCGTTCCC
CTGGGTGATGATGAATTTGAAGAACCAGAAAACTATCTGGCCGGAATTGAAGAAGCCAAACTTGGAGAAATAGAAACAGC
AGCCAAATACCGACAGATTTATTATGGACTTAGAACCCGGGAGCACCGGGATAAACTCTTTGAAATAATAACAGATGAAT
TACGTCATGCCGACCTTTATGATTACCTATATACCCGGAACTTTTTAAACTTTTAA

Upstream 100 bases:

>100_bases
TATTGTATCCCTCCCTTTGAACAAATAACACCTATTAACAGTATACTATTATAAAATATTATTTTAAATATATTTTCTAC
TATTTTTAGGAGGTGACACC

Downstream 100 bases:

>100_bases
AACAACCTGCTGTAAAAAAACAGGCAGGGTATTAACAATCCTGCCTGTTTAACCAATATTAGTCCTGCCTGCTTAACTAA
TCTTATTTTTAAGCCATGTT

Product: Rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNSNFEPQQVFNPPLEITLELISRAVAGETTDRRFYRYLLNAAPNEKERAIISGIREDELRHYELFRQIYRDITGRNPVP
LGDDEFEEPENYLAGIEEAKLGEIETAAKYRQIYYGLRTREHRDKLFEIITDELRHADLYDYLYTRNFLNF

Sequences:

>Translated_151_residues
MNSNFEPQQVFNPPLEITLELISRAVAGETTDRRFYRYLLNAAPNEKERAIISGIREDELRHYELFRQIYRDITGRNPVP
LGDDEFEEPENYLAGIEEAKLGEIETAAKYRQIYYGLRTREHRDKLFEIITDELRHADLYDYLYTRNFLNF
>Mature_151_residues
MNSNFEPQQVFNPPLEITLELISRAVAGETTDRRFYRYLLNAAPNEKERAIISGIREDELRHYELFRQIYRDITGRNPVP
LGDDEFEEPENYLAGIEEAKLGEIETAAKYRQIYYGLRTREHRDKLFEIITDELRHADLYDYLYTRNFLNF

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18028; Mature: 18028

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNFEPQQVFNPPLEITLELISRAVAGETTDRRFYRYLLNAAPNEKERAIISGIREDEL
CCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
RHYELFRQIYRDITGRNPVPLGDDEFEEPENYLAGIEEAKLGEIETAAKYRQIYYGLRTR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH
EHRDKLFEIITDELRHADLYDYLYTRNFLNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSNFEPQQVFNPPLEITLELISRAVAGETTDRRFYRYLLNAAPNEKERAIISGIREDEL
CCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
RHYELFRQIYRDITGRNPVPLGDDEFEEPENYLAGIEEAKLGEIETAAKYRQIYYGLRTR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH
EHRDKLFEIITDELRHADLYDYLYTRNFLNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA