| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931300
Identifier: 220931300
GI number: 220931300
Start: 488477
End: 489553
Strand: Direct
Name: 220931300
Synonym: Hore_04550
Alternate gene names: NA
Gene position: 488477-489553 (Clockwise)
Preceding gene: 220931299
Following gene: 220931301
Centisome position: 18.95
GC content: 35.93
Gene sequence:
>1077_bases TTGAAAAAGTTTTTTATCATTTTATTAATGTTTGTTATAGTAGTAATATCGCTTCTTGTCTTTCAAAATGAACGCATGGC CAGTAGACTGAAGCCTCCTCTTGATGAACCATACCTGACTGATATTGAAGTAAGTAGAGTCAGGGAAATATATCGGGTTC AGACTACCCTGGGGAATCAGGTCTGGCCGGGTTTTGGTGACTTACATATACCGGTTTTATTGTATAATGACAGGTATTAT TTTATATTTACAGAAGGAAAACCTTCTCTCTTGTGGAAACCAGTCAGTAGAAACAATGACCAGGAAATTACTTATTACCG TAACTTGGTGAAAAATCCACAGGCCTTTGCCGTAAAAATAGGTGACCAGTGGGCCGGTAGTTTTGGGACTCTTAAGAAAG CAAATAAAAGTTATTATCTTGGTATAAGGAGTCAACTCCCACCGGTATTAAAAAATCTTTTTCCATATCAGTTGGCGACT TTATCAGATGATTTTTATGTTGCGGCTATTATTCATGAAATGTTTCACGCCTTCCAGGCTGAACAGTTTCCCGGGAAATT CAGGAAAGCTGGGTATGTATATAATGTTATAAATAAATATCCCTACCATGATGAAAGTATTATTCAATTATGGAATAAAG AAGGAGAAATGTTAGCCCGGGCTTTAGAATCCAGTGATAAAAAGGAAATAGTTGCCTGTCTTTCTCAATTTATAAAGATC AGGGAAAAAAGAAGGCAGAAGCTTACCCCGGAATTGATTGAATTAGAAAAAAGAATTGAATGGCTGGAAGGCCTTGCTAA ATATGCTGAAATGAAAGCATATGAGCTTGCTGCCGGTCAAGGCAGAGGAACAGGAATGATAAATTATAAAAAAGGCTTAC CATACTGGCAGCAGGAAATAGGAAGATTGAAGAAATTGGGTGAAGTAAGTATGGGGGATGATTTTCGTTTTTATTTAAGT GGAATGGCCCAGGCACGTTTACTGGATAAACTAAAGTTAGATTGGAAAAAAGAAGTTATGAAAAATGACGTTTTTCTTGA AGATATAATCATAAACTATCTTTCAAAATTAAATTAA
Upstream 100 bases:
>100_bases GATAAAAGGTTAATTAGACATGAATATCTGAAAAGGGATTATACCACCTCTAACCGGTGAATTTTGCTATATTAGGATTA ATTAAAGGAGATGTGATGAC
Downstream 100 bases:
>100_bases AGAAAGAGGGGGTTTCACGTGAATTGCCCTTTTTGTGCCATAAGCCACAAAGATTATATTGCAGAAAATGAATATGCTTT TGCCATTTATGATAAATACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKKFFIILLMFVIVVISLLVFQNERMASRLKPPLDEPYLTDIEVSRVREIYRVQTTLGNQVWPGFGDLHIPVLLYNDRYY FIFTEGKPSLLWKPVSRNNDQEITYYRNLVKNPQAFAVKIGDQWAGSFGTLKKANKSYYLGIRSQLPPVLKNLFPYQLAT LSDDFYVAAIIHEMFHAFQAEQFPGKFRKAGYVYNVINKYPYHDESIIQLWNKEGEMLARALESSDKKEIVACLSQFIKI REKRRQKLTPELIELEKRIEWLEGLAKYAEMKAYELAAGQGRGTGMINYKKGLPYWQQEIGRLKKLGEVSMGDDFRFYLS GMAQARLLDKLKLDWKKEVMKNDVFLEDIIINYLSKLN
Sequences:
>Translated_358_residues MKKFFIILLMFVIVVISLLVFQNERMASRLKPPLDEPYLTDIEVSRVREIYRVQTTLGNQVWPGFGDLHIPVLLYNDRYY FIFTEGKPSLLWKPVSRNNDQEITYYRNLVKNPQAFAVKIGDQWAGSFGTLKKANKSYYLGIRSQLPPVLKNLFPYQLAT LSDDFYVAAIIHEMFHAFQAEQFPGKFRKAGYVYNVINKYPYHDESIIQLWNKEGEMLARALESSDKKEIVACLSQFIKI REKRRQKLTPELIELEKRIEWLEGLAKYAEMKAYELAAGQGRGTGMINYKKGLPYWQQEIGRLKKLGEVSMGDDFRFYLS GMAQARLLDKLKLDWKKEVMKNDVFLEDIIINYLSKLN >Mature_358_residues MKKFFIILLMFVIVVISLLVFQNERMASRLKPPLDEPYLTDIEVSRVREIYRVQTTLGNQVWPGFGDLHIPVLLYNDRYY FIFTEGKPSLLWKPVSRNNDQEITYYRNLVKNPQAFAVKIGDQWAGSFGTLKKANKSYYLGIRSQLPPVLKNLFPYQLAT LSDDFYVAAIIHEMFHAFQAEQFPGKFRKAGYVYNVINKYPYHDESIIQLWNKEGEMLARALESSDKKEIVACLSQFIKI REKRRQKLTPELIELEKRIEWLEGLAKYAEMKAYELAAGQGRGTGMINYKKGLPYWQQEIGRLKKLGEVSMGDDFRFYLS GMAQARLLDKLKLDWKKEVMKNDVFLEDIIINYLSKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41907; Mature: 41907
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFIILLMFVIVVISLLVFQNERMASRLKPPLDEPYLTDIEVSRVREIYRVQTTLGNQ CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC VWPGFGDLHIPVLLYNDRYYFIFTEGKPSLLWKPVSRNNDQEITYYRNLVKNPQAFAVKI CCCCCCCEEEEEEEECCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEE GDQWAGSFGTLKKANKSYYLGIRSQLPPVLKNLFPYQLATLSDDFYVAAIIHEMFHAFQA CCHHCCCHHHHHHCCCCEEEEEHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHH EQFPGKFRKAGYVYNVINKYPYHDESIIQLWNKEGEMLARALESSDKKEIVACLSQFIKI HHCCCHHHHCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH REKRRQKLTPELIELEKRIEWLEGLAKYAEMKAYELAAGQGRGTGMINYKKGLPYWQQEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHH GRLKKLGEVSMGDDFRFYLSGMAQARLLDKLKLDWKKEVMKNDVFLEDIIINYLSKLN HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKFFIILLMFVIVVISLLVFQNERMASRLKPPLDEPYLTDIEVSRVREIYRVQTTLGNQ CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC VWPGFGDLHIPVLLYNDRYYFIFTEGKPSLLWKPVSRNNDQEITYYRNLVKNPQAFAVKI CCCCCCCEEEEEEEECCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEE GDQWAGSFGTLKKANKSYYLGIRSQLPPVLKNLFPYQLATLSDDFYVAAIIHEMFHAFQA CCHHCCCHHHHHHCCCCEEEEEHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHH EQFPGKFRKAGYVYNVINKYPYHDESIIQLWNKEGEMLARALESSDKKEIVACLSQFIKI HHCCCHHHHCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH REKRRQKLTPELIELEKRIEWLEGLAKYAEMKAYELAAGQGRGTGMINYKKGLPYWQQEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHH GRLKKLGEVSMGDDFRFYLSGMAQARLLDKLKLDWKKEVMKNDVFLEDIIINYLSKLN HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA