| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931299
Identifier: 220931299
GI number: 220931299
Start: 487996
End: 488436
Strand: Direct
Name: 220931299
Synonym: Hore_04540
Alternate gene names: NA
Gene position: 487996-488436 (Clockwise)
Preceding gene: 220931298
Following gene: 220931300
Centisome position: 18.93
GC content: 29.71
Gene sequence:
>441_bases ATGCCAAAAAGAATATATAAATATTTTATTTTTATCATGTCGCTTGTTTTCTTTGTTTTAAGTATCTACTATTTCCAGAT GAATGTCTATGAGATAGGTTTAAAGCCATACAATAATCTAAAAAGTGATAGGATGACAGGTATAGAAGAGTTTTTACTTC ATGTTGATAAAGCTTCTAAAGTAATTTTATTGCATAATGCAAAGATTGGGGGAGGTTATGTTGAGTTTAAAATAACGGGG GAGGATGGGCGTATAATTGACAAATATCGATTAAGTAGTAATAAATTGATAAACAGAGTTTATAACTTGAATAAAGGTAT TTATCAATGTACCATTGAGAGGGATGTAAAAAACAGCAGGGAAAATTTCAGATTCTATTATGATAAAAGGTTAATTAGAC ATGAATATCTGAAAAGGGATTATACCACCTCTAACCGGTGA
Upstream 100 bases:
>100_bases ATGTTTATTTTATTAATGATTATCTTAATAACCCTGTTTTACTTATTAAATTACAGGCTGATAAAGAATTTTGAATATAA ATACTAAAGAGGTGCTCAAG
Downstream 100 bases:
>100_bases ATTTTGCTATATTAGGATTAATTAAAGGAGATGTGATGACTTGAAAAAGTTTTTTATCATTTTATTAATGTTTGTTATAG TAGTAATATCGCTTCTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASKVILLHNAKIGGGYVEFKITG EDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSRENFRFYYDKRLIRHEYLKRDYTTSNR
Sequences:
>Translated_146_residues MPKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASKVILLHNAKIGGGYVEFKITG EDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSRENFRFYYDKRLIRHEYLKRDYTTSNR >Mature_145_residues PKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASKVILLHNAKIGGGYVEFKITGE DGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSRENFRFYYDKRLIRHEYLKRDYTTSNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17642; Mature: 17511
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE VILLHNAKIGGGYVEFKITGEDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSR EEEEECCEECCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEHHHHCCH ENFRFYYDKRLIRHEYLKRDYTTSNR HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASK CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE VILLHNAKIGGGYVEFKITGEDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSR EEEEECCEECCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEHHHHCCH ENFRFYYDKRLIRHEYLKRDYTTSNR HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA