| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931197
Identifier: 220931197
GI number: 220931197
Start: 364178
End: 364714
Strand: Direct
Name: 220931197
Synonym: Hore_03490
Alternate gene names: NA
Gene position: 364178-364714 (Clockwise)
Preceding gene: 220931196
Following gene: 220931198
Centisome position: 14.13
GC content: 33.89
Gene sequence:
>537_bases ATGCAGGCCTTACCCTATAGATATACCAAAACAGAACTTAAAGAATTATTAAAGAGCCTTACAGTAATTATTGATACCAG GGAACAGAAAAACCAGCATATAACTGATTACCTGGACGATAAAGGGATCCCTTATAAAACCAAAAAATTAAATTTTGGTG ATTATTCATTTTACCTTCCAGAGCAGCCGGAATTAGGCATACAGCGGCCGATGTACTTCAATAATGAAATAGTGATTGAG CGTAAACGGTCCTTGAATGAACTAAGCAATAACTTTACCCATGACAGGGCCCAATTTGAAAATGAACTTATCCGGGCCAG TAATAGTAAATTTATTTTATTAGTTGAGAATGTTAAAGGATACCAGAATATTATAAAACATAACTACCGAACAGATTATA AACCTAAATCTTATATAGCAACCCTCCATGCATATAGGGCTAGATATAACCTAGAGATAATATTTATAGACCCGGCCTAT TCAGGGAACTTTATCTATTACACCTTTTATTATTGGCTTAGAGAATACTTAAAATAG
Upstream 100 bases:
>100_bases AAGTAAGATTGGCCCGGCAAATTGTTGCTGACTGTTTGAAATATAATCAGCGAATACCTAAATTTATACTGGAATTAGCA GGATATAGGGAAGTGGTTTA
Downstream 100 bases:
>100_bases GAGTTGGCAATATGATAACGATAAGGGAAAGAGCAGGCCCAAATAATAAATAAACCATAAACTACTCAAAAATAAAATAT TAAGGAGTTGAAACAATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MQALPYRYTKTELKELLKSLTVIIDTREQKNQHITDYLDDKGIPYKTKKLNFGDYSFYLPEQPELGIQRPMYFNNEIVIE RKRSLNELSNNFTHDRAQFENELIRASNSKFILLVENVKGYQNIIKHNYRTDYKPKSYIATLHAYRARYNLEIIFIDPAY SGNFIYYTFYYWLREYLK
Sequences:
>Translated_178_residues MQALPYRYTKTELKELLKSLTVIIDTREQKNQHITDYLDDKGIPYKTKKLNFGDYSFYLPEQPELGIQRPMYFNNEIVIE RKRSLNELSNNFTHDRAQFENELIRASNSKFILLVENVKGYQNIIKHNYRTDYKPKSYIATLHAYRARYNLEIIFIDPAY SGNFIYYTFYYWLREYLK >Mature_178_residues MQALPYRYTKTELKELLKSLTVIIDTREQKNQHITDYLDDKGIPYKTKKLNFGDYSFYLPEQPELGIQRPMYFNNEIVIE RKRSLNELSNNFTHDRAQFENELIRASNSKFILLVENVKGYQNIIKHNYRTDYKPKSYIATLHAYRARYNLEIIFIDPAY SGNFIYYTFYYWLREYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21589; Mature: 21589
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALPYRYTKTELKELLKSLTVIIDTREQKNQHITDYLDDKGIPYKTKKLNFGDYSFYLP CCCCCCCCCHHHHHHHHHHHHEEEECCHHCCCHHHHHHCCCCCCCEEEECCCCCEEEECC EQPELGIQRPMYFNNEIVIERKRSLNELSNNFTHDRAQFENELIRASNSKFILLVENVKG CCCCCCCCCCEEECCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH YQNIIKHNYRTDYKPKSYIATLHAYRARYNLEIIFIDPAYSGNFIYYTFYYWLREYLK HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure MQALPYRYTKTELKELLKSLTVIIDTREQKNQHITDYLDDKGIPYKTKKLNFGDYSFYLP CCCCCCCCCHHHHHHHHHHHHEEEECCHHCCCHHHHHHCCCCCCCEEEECCCCCEEEECC EQPELGIQRPMYFNNEIVIERKRSLNELSNNFTHDRAQFENELIRASNSKFILLVENVKG CCCCCCCCCCEEECCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH YQNIIKHNYRTDYKPKSYIATLHAYRARYNLEIIFIDPAYSGNFIYYTFYYWLREYLK HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA