| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931196
Identifier: 220931196
GI number: 220931196
Start: 363522
End: 364040
Strand: Direct
Name: 220931196
Synonym: Hore_03480
Alternate gene names: NA
Gene position: 363522-364040 (Clockwise)
Preceding gene: 220931195
Following gene: 220931197
Centisome position: 14.1
GC content: 36.8
Gene sequence:
>519_bases ATGACTGGATATGAAATTATAAACGAATCAGAGAAGATTGGCTATAAATTAGAATTAAGGCCCGGTCCTAAGATTGGTTT ATCATTAAAGCCGGGTTATAATCCCGATCCACAGGAAGCAGAAAGATTAATAAATAAATTGAAGGCAAACAAGGAAAATG TAATTGAATATTTACAATTAGATGATAAAGCAGCATTTAATAAATACATTGAAGAATTAAGGGAACAAAACCGATACGAT CCCCGGCCAGATTTATCAGAGGACAGCGAATTATGGCAGACGGTATTAAAGGAAGCAGAGAAACAGGATAAGCAGGTATA TAGTAATTTACATGGTTGCAGGTGTGGAGGAGCAAGGTTAAAGACAGAGAAAGGCCAGCTGAAACTTATTCCAGCTATTG GCCCGGATCAGTTTTGGAAGAATAAAGAGGAATGGGACCAGGACCGGAAAGAGTTTTTATTACCTTATGCCTCAGACATT AAAGAGATATTTATAAAAGTACAAAGGAAGTGTTGCTAA
Upstream 100 bases:
>100_bases GATACTGAATATAATAAATCGAATAAATCGAATAAATCGAATATAACTCCAGAAATAAAAAAAGATGAAAATGGAGTTAT AATCGAAGGGATGATATAAA
Downstream 100 bases:
>100_bases ATGGGTGCTAAAATATATCAATTTCCTTTAAATGAAAAAGTAAGATTGGCCCGGCAAATTGTTGCTGACTGTTTGAAATA TAATCAGCGAATACCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTGYEIINESEKIGYKLELRPGPKIGLSLKPGYNPDPQEAERLINKLKANKENVIEYLQLDDKAAFNKYIEELREQNRYD PRPDLSEDSELWQTVLKEAEKQDKQVYSNLHGCRCGGARLKTEKGQLKLIPAIGPDQFWKNKEEWDQDRKEFLLPYASDI KEIFIKVQRKCC
Sequences:
>Translated_172_residues MTGYEIINESEKIGYKLELRPGPKIGLSLKPGYNPDPQEAERLINKLKANKENVIEYLQLDDKAAFNKYIEELREQNRYD PRPDLSEDSELWQTVLKEAEKQDKQVYSNLHGCRCGGARLKTEKGQLKLIPAIGPDQFWKNKEEWDQDRKEFLLPYASDI KEIFIKVQRKCC >Mature_171_residues TGYEIINESEKIGYKLELRPGPKIGLSLKPGYNPDPQEAERLINKLKANKENVIEYLQLDDKAAFNKYIEELREQNRYDP RPDLSEDSELWQTVLKEAEKQDKQVYSNLHGCRCGGARLKTEKGQLKLIPAIGPDQFWKNKEEWDQDRKEFLLPYASDIK EIFIKVQRKCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20133; Mature: 20002
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYEIINESEKIGYKLELRPGPKIGLSLKPGYNPDPQEAERLINKLKANKENVIEYLQL CCCCHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHC DDKAAFNKYIEELREQNRYDPRPDLSEDSELWQTVLKEAEKQDKQVYSNLHGCRCGGARL CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE KTEKGQLKLIPAIGPDQFWKNKEEWDQDRKEFLLPYASDIKEIFIKVQRKCC ECCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TGYEIINESEKIGYKLELRPGPKIGLSLKPGYNPDPQEAERLINKLKANKENVIEYLQL CCCHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHC DDKAAFNKYIEELREQNRYDPRPDLSEDSELWQTVLKEAEKQDKQVYSNLHGCRCGGARL CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE KTEKGQLKLIPAIGPDQFWKNKEEWDQDRKEFLLPYASDIKEIFIKVQRKCC ECCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA