| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931187
Identifier: 220931187
GI number: 220931187
Start: 353308
End: 353907
Strand: Direct
Name: 220931187
Synonym: Hore_03390
Alternate gene names: NA
Gene position: 353308-353907 (Clockwise)
Preceding gene: 220931186
Following gene: 220931188
Centisome position: 13.7
GC content: 34.5
Gene sequence:
>600_bases ATGACATCATTTTTAAAAGCTCTGACGAGATTATCTCTCTCAAATGTGGTAATAATATTAGTGGTTTTAATATTAATGGT CCAGTCTGTTTCCGCACAGAAGTTTTATGAGATAAATGGATGGGAATTCAGAGATACCAAGGAGTTTATACAGTGGTGGT TAAGAACAGAATCTGATTACATCTCAGAGATTTTATTGTTTGATTCCGTAAAACTGGGTGGCGAAGTAATGAATGGGTTT TATCTTTCAAGGCCAACCGGAGAGGTAAAGCTTCTCAGGGTTGTATATACCGGTTTTGATAAATCAGGTAACATTTATTT AAAAATGTATAAAAAAAAGGATAATCTGTCTCCGGTAGATGAGACAGAGCTGGAGAGTATGGTTAAAGACCTTATTAACT CAAAACAGGCCATGGAAGATCCCATTTTTTCCAGGCAACAATTTTTTAAATCAATCACAGATTATTTTGAAGATGAGGGA CTTGAACTTACGATAGATCCCTCGAAAACAATAATTATAGATATTCTGGAAACTATACCCTTTTTAAAGTTAGAGGCAGA TTCCAAAACGTCAATACTAAATACCAGGGTGACAAAATAA
Upstream 100 bases:
>100_bases CAATAGGGAGCCGGGAGGCTCCTTTTTTTATAATAATTGTTCTAGATGGAATAATAAAATTAGTGTTTTGATTTATTAAA ATGAAAAGAGGGGATATGTA
Downstream 100 bases:
>100_bases CAGGGAAGGGTGTTAATATGAGAACTATCTGGAAGGGTGCCATTAGTTTCGGACTTGTAAATATCCCCATTAAACTGGTT ACGGCTACCACCAAAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTSFLKALTRLSLSNVVIILVVLILMVQSVSAQKFYEINGWEFRDTKEFIQWWLRTESDYISEILLFDSVKLGGEVMNGF YLSRPTGEVKLLRVVYTGFDKSGNIYLKMYKKKDNLSPVDETELESMVKDLINSKQAMEDPIFSRQQFFKSITDYFEDEG LELTIDPSKTIIIDILETIPFLKLEADSKTSILNTRVTK
Sequences:
>Translated_199_residues MTSFLKALTRLSLSNVVIILVVLILMVQSVSAQKFYEINGWEFRDTKEFIQWWLRTESDYISEILLFDSVKLGGEVMNGF YLSRPTGEVKLLRVVYTGFDKSGNIYLKMYKKKDNLSPVDETELESMVKDLINSKQAMEDPIFSRQQFFKSITDYFEDEG LELTIDPSKTIIIDILETIPFLKLEADSKTSILNTRVTK >Mature_198_residues TSFLKALTRLSLSNVVIILVVLILMVQSVSAQKFYEINGWEFRDTKEFIQWWLRTESDYISEILLFDSVKLGGEVMNGFY LSRPTGEVKLLRVVYTGFDKSGNIYLKMYKKKDNLSPVDETELESMVKDLINSKQAMEDPIFSRQQFFKSITDYFEDEGL ELTIDPSKTIIIDILETIPFLKLEADSKTSILNTRVTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23024; Mature: 22893
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFLKALTRLSLSNVVIILVVLILMVQSVSAQKFYEINGWEFRDTKEFIQWWLRTESDY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHCCHHH ISEILLFDSVKLGGEVMNGFYLSRPTGEVKLLRVVYTGFDKSGNIYLKMYKKKDNLSPVD HHHHHHHHHHHHCHHHHCCEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCC ETELESMVKDLINSKQAMEDPIFSRQQFFKSITDYFEDEGLELTIDPSKTIIIDILETIP HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCC FLKLEADSKTSILNTRVTK CEEEECCCCHHHHHCCCCC >Mature Secondary Structure TSFLKALTRLSLSNVVIILVVLILMVQSVSAQKFYEINGWEFRDTKEFIQWWLRTESDY CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHCCHHH ISEILLFDSVKLGGEVMNGFYLSRPTGEVKLLRVVYTGFDKSGNIYLKMYKKKDNLSPVD HHHHHHHHHHHHCHHHHCCEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCC ETELESMVKDLINSKQAMEDPIFSRQQFFKSITDYFEDEGLELTIDPSKTIIIDILETIP HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCC FLKLEADSKTSILNTRVTK CEEEECCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA