| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229644
Identifier: 221229644
GI number: 221229644
Start: 593303
End: 594970
Strand: Direct
Name: 221229644
Synonym: MLBr_00489
Alternate gene names: NA
Gene position: 593303-594970 (Clockwise)
Preceding gene: 221229643
Following gene: 221229645
Centisome position: 18.15
GC content: 62.23
Gene sequence:
>1668_bases TTGCGGTCCGGCTTATTCGGGGTTTTGCGGTGGACTGCAGTAGGCTTGGTCGCGACGCTGGTGGCTTCTTTGGCGCTGAC TGCGTGTTCTGGAAGCGCCGCGGGGGAGATCGTCTATGTGGTCGACGGGGCGTTGGGTACCTACAACACTAACACCATCG TCGGTGCTGCGTCGGCCGGAGCGCAGGCGTTTGCCCGCACGCTCATCGGCTTCGGCTATCACGGCCCCGATGGACAGATA GTCGCTGACCACGACTTCGGAACCATCACGGTGGTGGGCGGGGTGCCATTAGTGCTCGACTACCAGATAGCCGACAATGC TGTCTACTCCGACGGCAAGCAGGTGACTTGCGATGATTTGGTGCTGACCTGGGCTGCCCAGTCTGGGCGGTTTCCCGGCT TCGATGCTGCCACCCAGGCCGGTTACCGCGACATTGCTAATATCGAGTGCCTGGCCGGGCAGAAGAAATCCCGCGTGTTC TTCGTCCCGGACCGCAGCGTTGTCGATTATGAACAGCTGTTCGCCGCGACCTCGATGATGCCGTCACACGTCATCGCTGA CCAACTGAATATCGACGTGACGGAGGCATTGCTGACCCACAATGCGACATTGGTGGAACAGATCGCGCGATTGTGGAACA CCACCTGGGACCTCAAACCAGCTGTCGATTTGAGACGCTTCCCGTCGTCAGGCCCATACAAGATCGAATCCGTCTTGAAC GGTGGCGCTGTAGTGCTTGTAGCCAACGACCGTTGGTGGGGTCTCAAGGCGACCACCAAGCGGATCACAGTACGGCCACA GGAAGCCGACATCCAGGACCGAGTCAACAACCGCAGCGTCGACGTCGTCGATGTCGCGGTCGGGTCGTCGGGATCGCTGG CCACTCCGGACAATTACGCGCGCATCGACTCGCCGTCGGCGGGCATCGAGCAGCTGATCTTTGCGCCGCAGGGGCTGCTG GCTGCGGCTGCCGCCCGCCGCGCACTCGCGCTGTGTACGCCACGCGACGTGGTCGCTCGAGACGCGGGGTTGTCGATCGC CAACTCACGCCTGTCCCCGGCTACCGAGGATGCCATCGCTGCGGCCGACGGTGCTCGCGAGGCCGGCCAGTTCAGCAAGG CGGATCCCGCCGCAGCGCACGACGCACTTAGTGGTGAGACGTTGCCGGTGCGGATCGGCTACCAAGGGCCCAACGCACGG TTGGCGGCCACCGTCGGGACTATCGCCAAGGCGTGCGCTGTAGCTGGTATCAGTGTGTCCAGCGTTACCTTGGACTCCTC GACGGACCCCTCGGGCCCGCAGGCGCTTCGGGACGGAAAGATCGACGTGCTGTTGGCCAGCACTGGTGGCGCCACCGGCA GCGGATCGAGTGGGTCATCTTCGATGGATGCCTATGACCTACACACCGGCAACGGCAACAACCTGTCTGGCTATGCAAAC GCGCAGGTTGACAACAATATCGGCGCGTTGGCGGTATCCGCTGACCCAGCCGAGCGTGTTCGGCTCCTCGCCGATAGTGC ACCTGTACTCTGGGCGGATATGCCGACATTGCCTCTATACCGGCAGCAGCGAATGCTGCTGATGTCGAAGACAATGTATG CAGTTACCAGGAATCCGACCCGTTGGGGCGCGGGTTGGAACATGGATCGATGGGCGTTAGTACGATGA
Upstream 100 bases:
>100_bases GGCCGACCGGTACCCGACGTCCTACCGGCAAGCGAAACAACGTCGGTCGGCGGTAGTCAAGGTGGCTACCCGAGGTTGGC AAGCCGTGAGTGAGTACGAT
Downstream 100 bases:
>100_bases AAAGCTTTAAGGTTTGAGGAGGTGTCTCCGTGGCCGACCTTATCGCTGCCTTGACTCGGAATGCGGCCGATTTCCCGACG CCAGCCATCCAGTTCAAGGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MRSGLFGVLRWTAVGLVATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAGAQAFARTLIGFGYHGPDGQI VADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDLVLTWAAQSGRFPGFDAATQAGYRDIANIECLAGQKKSRVF FVPDRSVVDYEQLFAATSMMPSHVIADQLNIDVTEALLTHNATLVEQIARLWNTTWDLKPAVDLRRFPSSGPYKIESVLN GGAVVLVANDRWWGLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYARIDSPSAGIEQLIFAPQGLL AAAAARRALALCTPRDVVARDAGLSIANSRLSPATEDAIAAADGAREAGQFSKADPAAAHDALSGETLPVRIGYQGPNAR LAATVGTIAKACAVAGISVSSVTLDSSTDPSGPQALRDGKIDVLLASTGGATGSGSSGSSSMDAYDLHTGNGNNLSGYAN AQVDNNIGALAVSADPAERVRLLADSAPVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPTRWGAGWNMDRWALVR
Sequences:
>Translated_555_residues MRSGLFGVLRWTAVGLVATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAGAQAFARTLIGFGYHGPDGQI VADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDLVLTWAAQSGRFPGFDAATQAGYRDIANIECLAGQKKSRVF FVPDRSVVDYEQLFAATSMMPSHVIADQLNIDVTEALLTHNATLVEQIARLWNTTWDLKPAVDLRRFPSSGPYKIESVLN GGAVVLVANDRWWGLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYARIDSPSAGIEQLIFAPQGLL AAAAARRALALCTPRDVVARDAGLSIANSRLSPATEDAIAAADGAREAGQFSKADPAAAHDALSGETLPVRIGYQGPNAR LAATVGTIAKACAVAGISVSSVTLDSSTDPSGPQALRDGKIDVLLASTGGATGSGSSGSSSMDAYDLHTGNGNNLSGYAN AQVDNNIGALAVSADPAERVRLLADSAPVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPTRWGAGWNMDRWALVR >Mature_555_residues MRSGLFGVLRWTAVGLVATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAGAQAFARTLIGFGYHGPDGQI VADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDLVLTWAAQSGRFPGFDAATQAGYRDIANIECLAGQKKSRVF FVPDRSVVDYEQLFAATSMMPSHVIADQLNIDVTEALLTHNATLVEQIARLWNTTWDLKPAVDLRRFPSSGPYKIESVLN GGAVVLVANDRWWGLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYARIDSPSAGIEQLIFAPQGLL AAAAARRALALCTPRDVVARDAGLSIANSRLSPATEDAIAAADGAREAGQFSKADPAAAHDALSGETLPVRIGYQGPNAR LAATVGTIAKACAVAGISVSSVTLDSSTDPSGPQALRDGKIDVLLASTGGATGSGSSGSSSMDAYDLHTGNGNNLSGYAN AQVDNNIGALAVSADPAERVRLLADSAPVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPTRWGAGWNMDRWALVR
Specific function: Unknown
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2585c and M.bovis Mb2616c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y489_MYCLE (Q49646)
Other databases:
- EMBL: U00011 - EMBL: AL023591 - EMBL: AL583918 - PIR: A86970 - PIR: S72732 - RefSeq: NP_301429.1 - ProteinModelPortal: Q49646 - EnsemblBacteria: EBMYCT00000028514 - GeneID: 909242 - GenomeReviews: AL450380_GR - KEGG: mle:ML0489 - NMPDR: fig|272631.1.peg.301 - Leproma: ML0489 - GeneTree: EBGT00050000016139 - HOGENOM: HBG564678 - OMA: WNMDRWV - ProtClustDB: CLSK791940 - BioCyc: MLEP272631:ML0489-MONOMER - InterPro: IPR000914
Pfam domain/function: PF00496 SBP_bac_5
EC number: NA
Molecular weight: Translated: 58109; Mature: 58109
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGLFGVLRWTAVGLVATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCC AQAFARTLIGFGYHGPDGQIVADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDL HHHHHHHHHHCCEECCCCCEEEECCCCEEEEECCCEEEEEEEECCCCEECCCCEEEHHHE VLTWAAQSGRFPGFDAATQAGYRDIANIECLAGQKKSRVFFVPDRSVVDYEQLFAATSMM EEEEECCCCCCCCCCHHHHCCCHHCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCC PSHVIADQLNIDVTEALLTHNATLVEQIARLWNTTWDLKPAVDLRRFPSSGPYKIESVLN CHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEHEECC GGAVVLVANDRWWGLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYA CCEEEEEECCCEECEEECCEEEEECCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCC RIDSPSAGIEQLIFAPQGLLAAAAARRALALCTPRDVVARDAGLSIANSRLSPATEDAIA CCCCCCCCHHHHHHCCCHHHHHHHHHHHEEECCCHHHHHHCCCCEECCCCCCCCCHHHHH AADGAREAGQFSKADPAAAHDALSGETLPVRIGYQGPNARLAATVGTIAKACAVAGISVS HCCCCHHHCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEE SVTLDSSTDPSGPQALRDGKIDVLLASTGGATGSGSSGSSSMDAYDLHTGNGNNLSGYAN EEEECCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE AQVDNNIGALAVSADPAERVRLLADSAPVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPT CEECCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEECCCC RWGAGWNMDRWALVR CCCCCCCCCCEEECC >Mature Secondary Structure MRSGLFGVLRWTAVGLVATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCC AQAFARTLIGFGYHGPDGQIVADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDL HHHHHHHHHHCCEECCCCCEEEECCCCEEEEECCCEEEEEEEECCCCEECCCCEEEHHHE VLTWAAQSGRFPGFDAATQAGYRDIANIECLAGQKKSRVFFVPDRSVVDYEQLFAATSMM EEEEECCCCCCCCCCHHHHCCCHHCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCC PSHVIADQLNIDVTEALLTHNATLVEQIARLWNTTWDLKPAVDLRRFPSSGPYKIESVLN CHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEHEECC GGAVVLVANDRWWGLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYA CCEEEEEECCCEECEEECCEEEEECCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCC RIDSPSAGIEQLIFAPQGLLAAAAARRALALCTPRDVVARDAGLSIANSRLSPATEDAIA CCCCCCCCHHHHHHCCCHHHHHHHHHHHEEECCCHHHHHHCCCCEECCCCCCCCCHHHHH AADGAREAGQFSKADPAAAHDALSGETLPVRIGYQGPNARLAATVGTIAKACAVAGISVS HCCCCHHHCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEE SVTLDSSTDPSGPQALRDGKIDVLLASTGGATGSGSSGSSSMDAYDLHTGNGNNLSGYAN EEEECCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE AQVDNNIGALAVSADPAERVRLLADSAPVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPT CEECCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEECCCC RWGAGWNMDRWALVR CCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002