| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is relA [H]
Identifier: 221229645
GI number: 221229645
Start: 595616
End: 597979
Strand: Direct
Name: relA [H]
Synonym: MLBr_00491
Alternate gene names: 221229645
Gene position: 595616-597979 (Clockwise)
Preceding gene: 221229644
Following gene: 221229647
Centisome position: 18.23
GC content: 59.73
Gene sequence:
>2364_bases GTGGCGGACGACCAAGGTACGGCGCAAGCTTTGCAACCAGTTCAGGTGGTCCCCGGCCCTGCTGTTGAGGCACCGGAGAC GCCGGTCGAAACCCTGAAGACTTCTAGCAGTGCGTCTCGTCGGGTCCGGGCTCGGTTGGCCCGTCGGATGACCGCTCAAC GCAGCACCATCAGTCCCGTGCTCGAGCCGCTGGTGGCTGTGCATAAAGAGTTTTATCCCAAGGCAAACCTTTCGATAGTG CAGCGAGCCTTTGAAGTCGCCGACCAACGGCACGCCAGTCAACTGCGGCGTTCCGGTGATCCGTACATCACCCATCCGCT GGCCGTTGCCAACATTTTGGCTGAGTTGGGCATGGATATCACTACCCTGGTGGCTGCGCTACTGCACGACACGGTCGAGG ACACCGGTTACACGCTCGAGGCACTGTCCGAAGAATTTGGCGACGAGGTAGGCCATCTCGTCGACGGGGTGACCAAGCTG GATCGGGTGGTGCTGGGCAGTGCTGCCGAGGGCGAGACCATCCGCAAGATGATTACCGCAATGGCCCGTGATCCACGGGT GTTGGTTATCAAGGTGGCCGACCGGTTGCATAACATGCGCACCATGCGCTTCCTGCCTCCGGAAAAGCAGGCGCGCAAGG CCCGTGAGACATTGGAAGTCATTGCACCACTAGCGCATAGGCTAGGTATGGCCAGTGTTAAGTGGGAGTTGGAAGACCTG TCTTTCGCGATCTTGCATCCCAAAAAATACGAGGAGATCGTACGGCTGGTAGCGGGCCGTGCACCGTCCCGCGATACCTA CCTGGCCAAGGTCCGTGCCGAGATCATAAGTACCCTGGGTGCGTCGAAAATCAAGGCGACGGTGGAGGGCCGGCCCAAGC ATTACTGGTCGATTTATCAGAAAATGATCGTCAAGGGGCGAGACTTCGACGATATTCACGACTTGGTCGGCATCCGTATC CTGTGCGACGAGATCCGCGACTGCTATGCCGCTGTCGGCGTGGTGCATTCGTTGTGGCAGCCGATGGCGGGACGGTTTAA AGACTACATTGCTCAGCCGAGGTATGGTGTGTACCAGTCGTTGCACACCACGGTCGTTGGGCCCGAGGGCAAGCCTTTGG AAGTACAGATTCGTACCCGCGATATGCACCGTACCGCCGAATACGGCATAGCAGCGCACTGGCGCTATAAAGAAGCCAAG GGCCGCAACGGTGTTCTGCATCCACATGCAGCCGCAGAGATCGACGATATGGCCTGGATGCGGCAGCTTCTCGACTGGCA ACGAGAGGCCGCCGAACCAGGTGAGTTCTTGGAGTCGTTGCGTTACGACCTTGCAGTGCAAGAGATTTTTGTGTTCACTC CTAAAGGGGACGTCATCACGTTGCCGACTGGGTCAACGCCGGTGGACTTTGCCTATGCGGTGCACACCGAGGTCGGGCAC CGATGCATTGGTGCCAGAGTCAACGGACGACTGGTGGCGCTGGAGCGCAAGCTGGAAAACGGGGAATTCGTAGAGATTTT CACATCCAAAGCTCCCAATGCCGGGCCTTCGCGGGATTGGCAGCAGTTCGTGGTGTCGCCGCGCGCTAAGACGAAGATCC GTCAATGGTTCGCCAAGGAGCGGCGTGAGGAAGCACTGGAGGCTGGTAAGGATGCGATGGCCCGCGAGGTACGTCGCGGT GGACTTCCTTTGCAGCGCTTGGTGAATGGTGAGTCCATGGCGGCAGTGGCCCGTGAGCTACATTACATTGACGTGTCCGC ACTGTATACCGCAATTGGTGAAGGACACGTGTCTGCCCGGCACGTCGTGCAGCGGCTGTTGGCCGAGTTGGGCGGTATCG ATCAGGCTGAAGAGGAACTGGCCGAACGGTCCACACCGACGACCATGCTGCGCCGTCAACGCAGCACCGATGATGTCGGG GTTTCGGTCCCCGGCGCCCCAGGTGTGCTGACTAAGCTAGCCAAATGCTGCACGCCGGTACCTGGCGATGCGATCATGGG GTTCGTTACCCGCGGCGGCGGGGTTAGTGTGCACCGCACCGACTGCACCAACACGGCATCGCTGCAGCAGCAGGCCGAGC GCATCATCGAGGTGTTGTGGGCGCCGTCGTCGTCGTCGGTGTTTCTGGTGGCGATTCAGGTGGAGGCGCTCGACCGGCAT CGGCTGCTGTTGGACATAACACGCGCGTTAGCCGACGAAAGGGTGGACATTCTATCGGCGTCGGTCACCACGTCGGGTGA CCGGGTGGCGATCAGCCGGTTTACCTTCGAGATGGGTGACCCCAAGCACCTCGGACATCTGCTCAATGTGGTCCGCAATG TCGAAGGCGTTTACGATGTCTATCGGGTGATGTCTGCGTCTTGA
Upstream 100 bases:
>100_bases CTAGCCTCGCTATCTGGGTACTTCCCCTCCGTGCTGGAATGGCTTGGGAGAAGCAGGTCAATCGGACTCAGGGATATCCT TAAGGTCGGAGGTGACCAAC
Downstream 100 bases:
>100_bases CGTTCGGGTGGTTACTCGGCAAATCCCCCTCTGCTTTGACGTGGATGACCGGACGGCTTTAGTCGAGCCGCAGCGACTCG ATGGTAACTTCGGTGGCTGG
Product: putative GTP pyrophosphokinase
Products: NA
Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]
Number of amino acids: Translated: 787; Mature: 786
Protein sequence:
>787_residues MADDQGTAQALQPVQVVPGPAVEAPETPVETLKTSSSASRRVRARLARRMTAQRSTISPVLEPLVAVHKEFYPKANLSIV QRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDITTLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKL DRVVLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDL SFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGIRI LCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAK GRNGVLHPHAAAEIDDMAWMRQLLDWQREAAEPGEFLESLRYDLAVQEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGH RCIGARVNGRLVALERKLENGEFVEIFTSKAPNAGPSRDWQQFVVSPRAKTKIRQWFAKERREEALEAGKDAMAREVRRG GLPLQRLVNGESMAAVARELHYIDVSALYTAIGEGHVSARHVVQRLLAELGGIDQAEEELAERSTPTTMLRRQRSTDDVG VSVPGAPGVLTKLAKCCTPVPGDAIMGFVTRGGGVSVHRTDCTNTASLQQQAERIIEVLWAPSSSSVFLVAIQVEALDRH RLLLDITRALADERVDILSASVTTSGDRVAISRFTFEMGDPKHLGHLLNVVRNVEGVYDVYRVMSAS
Sequences:
>Translated_787_residues MADDQGTAQALQPVQVVPGPAVEAPETPVETLKTSSSASRRVRARLARRMTAQRSTISPVLEPLVAVHKEFYPKANLSIV QRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDITTLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKL DRVVLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDL SFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGIRI LCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAK GRNGVLHPHAAAEIDDMAWMRQLLDWQREAAEPGEFLESLRYDLAVQEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGH RCIGARVNGRLVALERKLENGEFVEIFTSKAPNAGPSRDWQQFVVSPRAKTKIRQWFAKERREEALEAGKDAMAREVRRG GLPLQRLVNGESMAAVARELHYIDVSALYTAIGEGHVSARHVVQRLLAELGGIDQAEEELAERSTPTTMLRRQRSTDDVG VSVPGAPGVLTKLAKCCTPVPGDAIMGFVTRGGGVSVHRTDCTNTASLQQQAERIIEVLWAPSSSSVFLVAIQVEALDRH RLLLDITRALADERVDILSASVTTSGDRVAISRFTFEMGDPKHLGHLLNVVRNVEGVYDVYRVMSAS >Mature_786_residues ADDQGTAQALQPVQVVPGPAVEAPETPVETLKTSSSASRRVRARLARRMTAQRSTISPVLEPLVAVHKEFYPKANLSIVQ RAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDITTLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKLD RVVLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLS FAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGIRIL CDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKG RNGVLHPHAAAEIDDMAWMRQLLDWQREAAEPGEFLESLRYDLAVQEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHR CIGARVNGRLVALERKLENGEFVEIFTSKAPNAGPSRDWQQFVVSPRAKTKIRQWFAKERREEALEAGKDAMAREVRRGG LPLQRLVNGESMAAVARELHYIDVSALYTAIGEGHVSARHVVQRLLAELGGIDQAEEELAERSTPTTMLRRQRSTDDVGV SVPGAPGVLTKLAKCCTPVPGDAIMGFVTRGGGVSVHRTDCTNTASLQQQAERIIEVLWAPSSSSVFLVAIQVEALDRHR LLLDITRALADERVDILSASVTTSGDRVAISRFTFEMGDPKHLGHLLNVVRNVEGVYDVYRVMSAS
Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38348360, Length=136, Percent_Identity=39.7058823529412, Blast_Score=73, Evalue=9e-13, Organism=Escherichia coli, GI1790082, Length=729, Percent_Identity=39.0946502057613, Blast_Score=505, Evalue=1e-144, Organism=Escherichia coli, GI1789147, Length=691, Percent_Identity=38.0607814761216, Blast_Score=484, Evalue=1e-138,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR012675 - InterPro: IPR003607 - InterPro: IPR007685 - InterPro: IPR004811 - InterPro: IPR004095 - InterPro: IPR012676 [H]
Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]
EC number: =2.7.6.5 [H]
Molecular weight: Translated: 87267; Mature: 87136
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDQGTAQALQPVQVVPGPAVEAPETPVETLKTSSSASRRVRARLARRMTAQRSTISPV CCCCCCCHHHCCCCEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LEPLVAVHKEFYPKANLSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCH TTLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKLDRVVLGSAAEGETIRKMITA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDL HCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHC SFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVEGRPKHYWSIYQ EEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHEEEEECCCCHHHHHHHH KMIVKGRDFDDIHDLVGIRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWM HHHEEECCCCCCEEEEEECCHHHHHHHCCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHH RQLLDWQREAAEPGEFLESLRYDLAVQEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGH HHHHHHHHHCCCHHHHHHHHHHHHEEEHEEEECCCCCEEEECCCCCCCCHHHHHHHHHCC RCIGARVNGRLVALERKLENGEFVEIFTSKAPNAGPSRDWQQFVVSPRAKTKIRQWFAKE HHCCCCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RREEALEAGKDAMAREVRRGGLPLQRLVNGESMAAVARELHYIDVSALYTAIGEGHVSAR HHHHHHHHCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HVVQRLLAELGGIDQAEEELAERSTPTTMLRRQRSTDDVGVSVPGAPGVLTKLAKCCTPV HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCC PGDAIMGFVTRGGGVSVHRTDCTNTASLQQQAERIIEVLWAPSSSSVFLVAIQVEALDRH CCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHH RLLLDITRALADERVDILSASVTTSGDRVAISRFTFEMGDPKHLGHLLNVVRNVEGVYDV HHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH YRVMSAS HHHHHCC >Mature Secondary Structure ADDQGTAQALQPVQVVPGPAVEAPETPVETLKTSSSASRRVRARLARRMTAQRSTISPV CCCCCCHHHCCCCEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LEPLVAVHKEFYPKANLSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCH TTLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKLDRVVLGSAAEGETIRKMITA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDL HCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHC SFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVEGRPKHYWSIYQ EEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHEEEEECCCCHHHHHHHH KMIVKGRDFDDIHDLVGIRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWM HHHEEECCCCCCEEEEEECCHHHHHHHCCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHH RQLLDWQREAAEPGEFLESLRYDLAVQEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGH HHHHHHHHHCCCHHHHHHHHHHHHEEEHEEEECCCCCEEEECCCCCCCCHHHHHHHHHCC RCIGARVNGRLVALERKLENGEFVEIFTSKAPNAGPSRDWQQFVVSPRAKTKIRQWFAKE HHCCCCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RREEALEAGKDAMAREVRRGGLPLQRLVNGESMAAVARELHYIDVSALYTAIGEGHVSAR HHHHHHHHCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HVVQRLLAELGGIDQAEEELAERSTPTTMLRRQRSTDDVGVSVPGAPGVLTKLAKCCTPV HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCC PGDAIMGFVTRGGGVSVHRTDCTNTASLQQQAERIIEVLWAPSSSSVFLVAIQVEALDRH CCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHH RLLLDITRALADERVDILSASVTTSGDRVAISRFTFEMGDPKHLGHLLNVVRNVEGVYDV HHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH YRVMSAS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]