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The map label for this gene is ssb [H]

Identifier: 220919036

GI number: 220919036

Start: 4403278

End: 4403763

Strand: Direct

Name: ssb [H]

Synonym: A2cp1_3951

Alternate gene names: 220919036

Gene position: 4403278-4403763 (Clockwise)

Preceding gene: 220919035

Following gene: 220919037

Centisome position: 87.55

GC content: 73.05

Gene sequence:

>486_bases
ATGGTGAACAGGGTCATCCTCGTCGGGAACCTCGGGAAGGATCCGGAGGTCCGGTACACGTCCGGCGGCCAGGCGGTCGC
GAACCTCCGCATCGCCACCTCCCGCTCCTGGACCGACAAGCAGTCCGGGCAGCGCAAGGAGGAGACGGAGTGGCACGACG
TCGAGGTCTGGGGGAAGCAGGCCGAGCAGTGCGGTGAGTACCTGGCGAAGGGCCGCCAGGTCTACGTCGAGGGCCGGCTC
AAGACCGACAAGTGGCAGGACAAGCAGTCCGGCCAGGAGCGCTCGAAGGTGAAGGTGGTCGCCGAGACCGTCCGGTTCCT
CGGCGGTGGCGGCGGCGCCGGCCGCGGCGCCGGCGGCCCCGGCCGCCAGCACGGCCCCGACGACGCCCCTCCGGGCGGCT
TCGAGGAGCCGGATTCCGGCCCTGGCCCCGGCTTCGGCTCGGGGGGCGGCGCGGGCGGCGGTGGGCCGGACGACATTCCG
TTCTAG

Upstream 100 bases:

>100_bases
CGGGGCCCCGGCGTCGCCGATGTCAGGGGGGGCGGCTAGGCTCCAGCCTTCACTCACGACGCCTGCGTCCAGCGCAGGCC
ACGCAGGGGAGAGCGACGCC

Downstream 100 bases:

>100_bases
CCGGCGCGCATCGCGGGCAGCATCGACGGCGCGGGCCACTGGCCTCCGCCGTCTTCCTTTCGAGGCCATGGCGCCCCGCG
GGCCCGGAGGTGCGCGCGTG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVNRVILVGNLGKDPEVRYTSGGQAVANLRIATSRSWTDKQSGQRKEETEWHDVEVWGKQAEQCGEYLAKGRQVYVEGRL
KTDKWQDKQSGQERSKVKVVAETVRFLGGGGGAGRGAGGPGRQHGPDDAPPGGFEEPDSGPGPGFGSGGGAGGGGPDDIP
F

Sequences:

>Translated_161_residues
MVNRVILVGNLGKDPEVRYTSGGQAVANLRIATSRSWTDKQSGQRKEETEWHDVEVWGKQAEQCGEYLAKGRQVYVEGRL
KTDKWQDKQSGQERSKVKVVAETVRFLGGGGGAGRGAGGPGRQHGPDDAPPGGFEEPDSGPGPGFGSGGGAGGGGPDDIP
F
>Mature_161_residues
MVNRVILVGNLGKDPEVRYTSGGQAVANLRIATSRSWTDKQSGQRKEETEWHDVEVWGKQAEQCGEYLAKGRQVYVEGRL
KTDKWQDKQSGQERSKVKVVAETVRFLGGGGGAGRGAGGPGRQHGPDDAPPGGFEEPDSGPGPGFGSGGGAGGGGPDDIP
F

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=117, Percent_Identity=59.8290598290598, Blast_Score=130, Evalue=3e-32,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16906; Mature: 16906

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRVILVGNLGKDPEVRYTSGGQAVANLRIATSRSWTDKQSGQRKEETEWHDVEVWGKQ
CCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
AEQCGEYLAKGRQVYVEGRLKTDKWQDKQSGQERSKVKVVAETVRFLGGGGGAGRGAGGP
HHHHHHHHHCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRQHGPDDAPPGGFEEPDSGPGPGFGSGGGAGGGGPDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVNRVILVGNLGKDPEVRYTSGGQAVANLRIATSRSWTDKQSGQRKEETEWHDVEVWGKQ
CCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
AEQCGEYLAKGRQVYVEGRLKTDKWQDKQSGQERSKVKVVAETVRFLGGGGGAGRGAGGP
HHHHHHHHHCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRQHGPDDAPPGGFEEPDSGPGPGFGSGGGAGGGGPDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]