| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220919037
Identifier: 220919037
GI number: 220919037
Start: 4403913
End: 4404692
Strand: Direct
Name: 220919037
Synonym: A2cp1_3952
Alternate gene names: NA
Gene position: 4403913-4404692 (Clockwise)
Preceding gene: 220919036
Following gene: 220919038
Centisome position: 87.56
GC content: 74.1
Gene sequence:
>780_bases ATGTCCTTCTGGAAGCGATGGCTGGGCCGAGGCGCGTCCGAGGTGGAGCCTGCCGGCGAGGCGCCGGCGGCGGAGACGCC GGAGTTCCCCTACCCGCTCGTGGCCGTCCCGGGCCGCATCGCGCTGGAGGAGTGGCAGCGCCTGCGCGAGGCCTGGCGGC CGGAGGGCGCGTGCCCGGTGCTGCTCGGCACGCGCGAGCAGGTGGAGTCCGCGCGCGAGGGGCTGGAGGGCGGCGACGCG GCCACGATGCTGAAGGCCGCCGAGGTCCTCGACGCGCGCGAGGCGCTCGATCGCCGGCTGCGCGAGCTGGAGCAGGACTA CGCGGAGGATCCGCCGGACGACAACGAGACCGGCCTCTTCGTCCCGCAGGGCGCCTGGCCCGCCGCGCCGTCGCGCGGCC ACCAGCTCGGCGCGCACTGCGACATCACCACCGACCTCCCGCATCCGGTCGTGTACCTCGCGCGGATCCCGACCGTGCGC TCGTGGGAGGCCTTCGCCTACCTGAACTACGGTGCGTGGAACGCGTGCCCGGCGACCGAGGAGCACGTCGCGCTGCACCG GCACTGGCACGAGCGCCACGGCTCGGAGGTCTACGCGATCGCCGGAGACGTGGTGGAGTGCTGGGTGCCGCGCCCGCCGG AGGATCGCGAGGGCGCCGAGGCGCTCGCGCGCGAGCAGTGCCTGTACTGCGACGACATCGTGCACCAGGGGACGCAGACG CTGCTGAACCTCGCCGCCGAGCTGAAGGACGCGCACGCGTGGTTCTTCTGGTGGGACTGA
Upstream 100 bases:
>100_bases CGTCTTCCTTTCGAGGCCATGGCGCCCCGCGGGCCCGGAGGTGCGCGCGTGTCGGCGCGGCGCGCATTTCTGGTGTTCGC TCTCCGTGCGATAAGGCTGC
Downstream 100 bases:
>100_bases CCCGCCGTTGCCCCGGTCGACGAGGGAAGACGATGATCAAGCTCACCGAACTGCTCCGCACTCGCGGCTTCAGCGAGTCC AAGTCGACCAAGATCGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSFWKRWLGRGASEVEPAGEAPAAETPEFPYPLVAVPGRIALEEWQRLREAWRPEGACPVLLGTREQVESAREGLEGGDA ATMLKAAEVLDAREALDRRLRELEQDYAEDPPDDNETGLFVPQGAWPAAPSRGHQLGAHCDITTDLPHPVVYLARIPTVR SWEAFAYLNYGAWNACPATEEHVALHRHWHERHGSEVYAIAGDVVECWVPRPPEDREGAEALAREQCLYCDDIVHQGTQT LLNLAAELKDAHAWFFWWD
Sequences:
>Translated_259_residues MSFWKRWLGRGASEVEPAGEAPAAETPEFPYPLVAVPGRIALEEWQRLREAWRPEGACPVLLGTREQVESAREGLEGGDA ATMLKAAEVLDAREALDRRLRELEQDYAEDPPDDNETGLFVPQGAWPAAPSRGHQLGAHCDITTDLPHPVVYLARIPTVR SWEAFAYLNYGAWNACPATEEHVALHRHWHERHGSEVYAIAGDVVECWVPRPPEDREGAEALAREQCLYCDDIVHQGTQT LLNLAAELKDAHAWFFWWD >Mature_258_residues SFWKRWLGRGASEVEPAGEAPAAETPEFPYPLVAVPGRIALEEWQRLREAWRPEGACPVLLGTREQVESAREGLEGGDAA TMLKAAEVLDAREALDRRLRELEQDYAEDPPDDNETGLFVPQGAWPAAPSRGHQLGAHCDITTDLPHPVVYLARIPTVRS WEAFAYLNYGAWNACPATEEHVALHRHWHERHGSEVYAIAGDVVECWVPRPPEDREGAEALAREQCLYCDDIVHQGTQTL LNLAAELKDAHAWFFWWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29121; Mature: 28989
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFWKRWLGRGASEVEPAGEAPAAETPEFPYPLVAVPGRIALEEWQRLREAWRPEGACPV CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCEE LLGTREQVESAREGLEGGDAATMLKAAEVLDAREALDRRLRELEQDYAEDPPDDNETGLF EECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VPQGAWPAAPSRGHQLGAHCDITTDLPHPVVYLARIPTVRSWEAFAYLNYGAWNACPATE EECCCCCCCCCCCCCCCCCCEECCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCCCCCCH EHVALHRHWHERHGSEVYAIAGDVVECWVPRPPEDREGAEALAREQCLYCDDIVHQGTQT HHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLNLAAELKDAHAWFFWWD HHHHHHHHHHCCEEEEEEC >Mature Secondary Structure SFWKRWLGRGASEVEPAGEAPAAETPEFPYPLVAVPGRIALEEWQRLREAWRPEGACPV CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCEE LLGTREQVESAREGLEGGDAATMLKAAEVLDAREALDRRLRELEQDYAEDPPDDNETGLF EECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VPQGAWPAAPSRGHQLGAHCDITTDLPHPVVYLARIPTVRSWEAFAYLNYGAWNACPATE EECCCCCCCCCCCCCCCCCCEECCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCCCCCCH EHVALHRHWHERHGSEVYAIAGDVVECWVPRPPEDREGAEALAREQCLYCDDIVHQGTQT HHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLNLAAELKDAHAWFFWWD HHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA