Click here to switch to the map view.

The map label for this gene is fis [C]

Identifier: 220919019

GI number: 220919019

Start: 4376366

End: 4376752

Strand: Direct

Name: fis [C]

Synonym: A2cp1_3934

Alternate gene names: 220919019

Gene position: 4376366-4376752 (Clockwise)

Preceding gene: 220919018

Following gene: 220919020

Centisome position: 87.02

GC content: 78.04

Gene sequence:

>387_bases
GTGAAGGCGCTGCTCCTCGAGGGCGCGCCCGACGCGCTCCGGCGCGCCTGCGAGGCGGGGCGGCTGGAGGTGGTCGAGGT
GCGCTCGATCCCGGACGGCCGCGCCCGGCTCGCGCGCGAGGCGTTCGCGCTGGTGGACGGCCGCATCACGCGGCCCTGCG
CCCTCGACGAGGAGCTGCGCCAGCGGGTGGACGCCTTCTTCGACCGGCTCGAGGGCCAGCCCGCGAGCGGTCTCTACGAC
GCGGTGATGCGCGAGGTGGAGCGCCCCCTCATCTCGGGCGCGCTGGCCCGGGCCCGGGGCGTGCGCTCCGCCGCCGCGGA
GGCGCTCGGCATCGACCGCGGTACGCTGGCCCGCCGCATGCGCGCGCTCGGCCTGGACGAACCATGA

Upstream 100 bases:

>100_bases
GCGGGCGGCGACAGCTTCGAGCTCGATCCCGGCTTCCGCGCCTCGGAGGACGGCGAGTGAGCGCGCGCGGACCGCACGGC
GGCCGGCGGGGATCGGCGCG

Downstream 100 bases:

>100_bases
CCCAGACGCAGTCCCTCGCCCTGTACACCGCCGCCATCCTGGTGGGCGCGCTCACCGGCGGCTCGCTCCCGCTGCTCGGA
CGCGTGGGCCGCTCCGACAT

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKALLLEGAPDALRRACEAGRLEVVEVRSIPDGRARLAREAFALVDGRITRPCALDEELRQRVDAFFDRLEGQPASGLYD
AVMREVERPLISGALARARGVRSAAAEALGIDRGTLARRMRALGLDEP

Sequences:

>Translated_128_residues
MKALLLEGAPDALRRACEAGRLEVVEVRSIPDGRARLAREAFALVDGRITRPCALDEELRQRVDAFFDRLEGQPASGLYD
AVMREVERPLISGALARARGVRSAAAEALGIDRGTLARRMRALGLDEP
>Mature_128_residues
MKALLLEGAPDALRRACEAGRLEVVEVRSIPDGRARLAREAFALVDGRITRPCALDEELRQRVDAFFDRLEGQPASGLYD
AVMREVERPLISGALARARGVRSAAAEALGIDRGTLARRMRALGLDEP

Specific function: Activates Ribosomal RNA Transcription. Plays A Direct Role In Upstream Activation Of rRNA Promoters. Binds To A Recombinational Enhancer Sequence That Is Required To Stimulate Hin-Mediated DNA Inversion. Prevents Initiation Of DNA Replication From Oric.

COG id: COG2901

COG function: function code KL; Factor for inversion stimulation Fis, transcriptional activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13966; Mature: 13966

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLLEGAPDALRRACEAGRLEVVEVRSIPDGRARLAREAFALVDGRITRPCALDEELR
CCCEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH
QRVDAFFDRLEGQPASGLYDAVMREVERPLISGALARARGVRSAAAEALGIDRGTLARRM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RALGLDEP
HHHCCCCC
>Mature Secondary Structure
MKALLLEGAPDALRRACEAGRLEVVEVRSIPDGRARLAREAFALVDGRITRPCALDEELR
CCCEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH
QRVDAFFDRLEGQPASGLYDAVMREVERPLISGALARARGVRSAAAEALGIDRGTLARRM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RALGLDEP
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA