| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220919020
Identifier: 220919020
GI number: 220919020
Start: 4376749
End: 4377615
Strand: Direct
Name: 220919020
Synonym: A2cp1_3935
Alternate gene names: NA
Gene position: 4376749-4377615 (Clockwise)
Preceding gene: 220919019
Following gene: 220919023
Centisome position: 87.02
GC content: 73.93
Gene sequence:
>867_bases ATGACCCAGACGCAGTCCCTCGCCCTGTACACCGCCGCCATCCTGGTGGGCGCGCTCACCGGCGGCTCGCTCCCGCTGCT CGGACGCGTGGGCCGCTCCGACATCGGCCTGTCGTTCTCGGCGGGCGTGATGCTCGGCGCCGCGTTCTTCCACATGCTGC CCGAGGCGGTGGAGGAGAGCGGCGCGGGGATCCTGCCGTACGTGCTGGTCGGGTTCCTGCTCCTGTTCCTGCTGGAGCGC TTCGTGCTCGTGCACGTCTGCGCCGAGCCCGGGCCGAACGCGCGGCTCTCGCAGGCCGCCCCGCTTCCGGCCGGGGTGGA GGCCGCCGGCCACGATCACCACGCCCACGCCCACGCGCACGTCGGCGCGGACGGCGCGGTCGCGCTGGAGGAGGACGGCA CCGGGTGCGCCGTCCACACCACGCTCGGGCTCGCCGCGTTCGTGGGGATGAGCGCGCACACGCTGGTGGACGGCTTCGCG CTCGGCGCCGCGAGCGGCCACGCCGAGCTCGGGCTGCTCGTGTTCCTCGCCATCCTCGCGCACAAGATCCCGAACTCGTT CTCGCTCTCGGCCATCCTGCGCGCCGAGGGCTACTCGCGCGGCCGGGCGCTCGCGATGAACGCGGCCTTCGCGCTGATGG TGCCGGTCGGCGCCGGCATCTACCTGGTGCTGCGCCAGGTGGTGCGGGTCGAGACGTTCACCGCCGCCGCGCTCGCCGCG AGCGCGGGCACGTTCCTGCACCTGTCGCTCTCGGACATCCTCCCCGACCTGCACCGCCGCGGCGGCTCGAAGTGGGTCCT CTCCGGCGCGCTGCTGTTCGGGCTCGCGGTGATGTGGGGGCTGCGCGCGCTGAACCACGCGCACTGA
Upstream 100 bases:
>100_bases TGGCCCGGGCCCGGGGCGTGCGCTCCGCCGCCGCGGAGGCGCTCGGCATCGACCGCGGTACGCTGGCCCGCCGCATGCGC GCGCTCGGCCTGGACGAACC
Downstream 100 bases:
>100_bases ACGACAGTCCGCGGCCGGCGATCACCTGCGGTGATTGGCGGCCGCGCTGTCGTTCAGCAAGGTTGCCACGGGGCGTGCCG CCCCGCCCCGTCGAGCGGAG
Product: zinc/iron permease
Products: NA
Alternate protein names: Zinc/Iron ABC Transporter Permease; Metal Cation Transporter Zinc Family; Metal Cation Transporter ZIP Family
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTQTQSLALYTAAILVGALTGGSLPLLGRVGRSDIGLSFSAGVMLGAAFFHMLPEAVEESGAGILPYVLVGFLLLFLLER FVLVHVCAEPGPNARLSQAAPLPAGVEAAGHDHHAHAHAHVGADGAVALEEDGTGCAVHTTLGLAAFVGMSAHTLVDGFA LGAASGHAELGLLVFLAILAHKIPNSFSLSAILRAEGYSRGRALAMNAAFALMVPVGAGIYLVLRQVVRVETFTAAALAA SAGTFLHLSLSDILPDLHRRGGSKWVLSGALLFGLAVMWGLRALNHAH
Sequences:
>Translated_288_residues MTQTQSLALYTAAILVGALTGGSLPLLGRVGRSDIGLSFSAGVMLGAAFFHMLPEAVEESGAGILPYVLVGFLLLFLLER FVLVHVCAEPGPNARLSQAAPLPAGVEAAGHDHHAHAHAHVGADGAVALEEDGTGCAVHTTLGLAAFVGMSAHTLVDGFA LGAASGHAELGLLVFLAILAHKIPNSFSLSAILRAEGYSRGRALAMNAAFALMVPVGAGIYLVLRQVVRVETFTAAALAA SAGTFLHLSLSDILPDLHRRGGSKWVLSGALLFGLAVMWGLRALNHAH >Mature_287_residues TQTQSLALYTAAILVGALTGGSLPLLGRVGRSDIGLSFSAGVMLGAAFFHMLPEAVEESGAGILPYVLVGFLLLFLLERF VLVHVCAEPGPNARLSQAAPLPAGVEAAGHDHHAHAHAHVGADGAVALEEDGTGCAVHTTLGLAAFVGMSAHTLVDGFAL GAASGHAELGLLVFLAILAHKIPNSFSLSAILRAEGYSRGRALAMNAAFALMVPVGAGIYLVLRQVVRVETFTAAALAAS AGTFLHLSLSDILPDLHRRGGSKWVLSGALLFGLAVMWGLRALNHAH
Specific function: Unknown
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40255101, Length=261, Percent_Identity=29.1187739463602, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24651189, Length=284, Percent_Identity=28.5211267605634, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24651193, Length=284, Percent_Identity=28.5211267605634, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24651187, Length=284, Percent_Identity=28.5211267605634, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24651191, Length=284, Percent_Identity=28.5211267605634, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24651195, Length=284, Percent_Identity=28.5211267605634, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24651197, Length=284, Percent_Identity=28.5211267605634, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29609; Mature: 29478
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTQSLALYTAAILVGALTGGSLPLLGRVGRSDIGLSFSAGVMLGAAFFHMLPEAVEES CCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GAGILPYVLVGFLLLFLLERFVLVHVCAEPGPNARLSQAAPLPAGVEAAGHDHHAHAHAH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VGADGAVALEEDGTGCAVHTTLGLAAFVGMSAHTLVDGFALGAASGHAELGLLVFLAILA ECCCCCEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH HKIPNSFSLSAILRAEGYSRGRALAMNAAFALMVPVGAGIYLVLRQVVRVETFTAAALAA HHCCCCCCHHHHHHHCCCCCCCEEEHHHHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHH SAGTFLHLSLSDILPDLHRRGGSKWVLSGALLFGLAVMWGLRALNHAH CCCCEEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQTQSLALYTAAILVGALTGGSLPLLGRVGRSDIGLSFSAGVMLGAAFFHMLPEAVEES CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GAGILPYVLVGFLLLFLLERFVLVHVCAEPGPNARLSQAAPLPAGVEAAGHDHHAHAHAH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VGADGAVALEEDGTGCAVHTTLGLAAFVGMSAHTLVDGFALGAASGHAELGLLVFLAILA ECCCCCEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH HKIPNSFSLSAILRAEGYSRGRALAMNAAFALMVPVGAGIYLVLRQVVRVETFTAAALAA HHCCCCCCHHHHHHHCCCCCCCEEEHHHHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHH SAGTFLHLSLSDILPDLHRRGGSKWVLSGALLFGLAVMWGLRALNHAH CCCCEEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA