| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yfiP [C]
Identifier: 220917618
GI number: 220917618
Start: 2784634
End: 2785239
Strand: Direct
Name: yfiP [C]
Synonym: A2cp1_2518
Alternate gene names: 220917618
Gene position: 2784634-2785239 (Clockwise)
Preceding gene: 220917616
Following gene: 220917619
Centisome position: 55.37
GC content: 80.69
Gene sequence:
>606_bases GTGCCCCCCGCCCCCGACCGCTGCCCGCGCTGCGCCTTCCCGACCGCGCTCTGCCTGTGCGCCGAGGTGCCGCGGCTCCG CGCCCCGGTCCGCTTCCTGATCGTGCGCCACGCCAGCGAGCGGGAGCGGATGACCAACACGGCGCGCTGGGCCGCCCTGG CGCTCCCCGGGACCGAGATCCTGGAGCACGGCCTGCCGGGCGAGCCCCTCGCGCTGCCCGACCTCGCCGCCGCCGGCGCG GTGGCGCTGTTCCCCTCCCCCGTCCCGACCCCGCCGCCGCCCGCGCCGCCGCGCCTGGTGGTGGTGCCGGACGGCACCTG GAGCCAGGCCCGCCGCATGATGCAGCGGATCCCCGCGCTCCAGCGGCTCCCGCGGCTCACGCTGGGCGGTCCGCCCGACG GCCTGCGCCTGCGCCGCCCCCCGCGCGCCGACGGCATGTCCACGCTGGAGGCGATGGCCGGCACGCTCTCCGCGCTGGGC GCGCCGGACGCGGCGGAGCGGCTCCTCGGGCTGCACGCCGTGGCGGTGGAGCGGGTCCTCAGGCTGCGCGGCACCTGGGA GGCCGGCTGCGCCGAGGCCGCGCACGGCCACCTCCCCCGCGCATAG
Upstream 100 bases:
>100_bases AGTCTCAGGCGTGCAGGCATGCGGGAGAGTTAACGCGAGCGCGGCCCCGGTTCCACCCCACCGCGCGCGCCGCGGCCGCC CGTGGTAGATCGGCGTCGCC
Downstream 100 bases:
>100_bases GATCTGCCCGATGCCCTTCCGCTTCCACCCCGGCCCGAGGGACGCCGAGACCCGCGCCCGGCGCGGCACGCTCGAGACGC CGCACGGGCGCGTCGAGACC
Product: DTW domain containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPPAPDRCPRCAFPTALCLCAEVPRLRAPVRFLIVRHASERERMTNTARWAALALPGTEILEHGLPGEPLALPDLAAAGA VALFPSPVPTPPPPAPPRLVVVPDGTWSQARRMMQRIPALQRLPRLTLGGPPDGLRLRRPPRADGMSTLEAMAGTLSALG APDAAERLLGLHAVAVERVLRLRGTWEAGCAEAAHGHLPRA
Sequences:
>Translated_201_residues MPPAPDRCPRCAFPTALCLCAEVPRLRAPVRFLIVRHASERERMTNTARWAALALPGTEILEHGLPGEPLALPDLAAAGA VALFPSPVPTPPPPAPPRLVVVPDGTWSQARRMMQRIPALQRLPRLTLGGPPDGLRLRRPPRADGMSTLEAMAGTLSALG APDAAERLLGLHAVAVERVLRLRGTWEAGCAEAAHGHLPRA >Mature_200_residues PPAPDRCPRCAFPTALCLCAEVPRLRAPVRFLIVRHASERERMTNTARWAALALPGTEILEHGLPGEPLALPDLAAAGAV ALFPSPVPTPPPPAPPRLVVVPDGTWSQARRMMQRIPALQRLPRLTLGGPPDGLRLRRPPRADGMSTLEAMAGTLSALGA PDAAERLLGLHAVAVERVLRLRGTWEAGCAEAAHGHLPRA
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082133, Length=178, Percent_Identity=28.6516853932584, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21427; Mature: 21296
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAPDRCPRCAFPTALCLCAEVPRLRAPVRFLIVRHASERERMTNTARWAALALPGTEI CCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHH LEHGLPGEPLALPDLAAAGAVALFPSPVPTPPPPAPPRLVVVPDGTWSQARRMMQRIPAL HHCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH QRLPRLTLGGPPDGLRLRRPPRADGMSTLEAMAGTLSALGAPDAAERLLGLHAVAVERVL HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RLRGTWEAGCAEAAHGHLPRA HHCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure PPAPDRCPRCAFPTALCLCAEVPRLRAPVRFLIVRHASERERMTNTARWAALALPGTEI CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHH LEHGLPGEPLALPDLAAAGAVALFPSPVPTPPPPAPPRLVVVPDGTWSQARRMMQRIPAL HHCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH QRLPRLTLGGPPDGLRLRRPPRADGMSTLEAMAGTLSALGAPDAAERLLGLHAVAVERVL HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RLRGTWEAGCAEAAHGHLPRA HHCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA