| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is tgt [H]
Identifier: 220917619
GI number: 220917619
Start: 2785250
End: 2787289
Strand: Direct
Name: tgt [H]
Synonym: A2cp1_2519
Alternate gene names: 220917619
Gene position: 2785250-2787289 (Clockwise)
Preceding gene: 220917618
Following gene: 220917620
Centisome position: 55.38
GC content: 77.35
Gene sequence:
>2040_bases ATGCCCTTCCGCTTCCACCCCGGCCCGAGGGACGCCGAGACCCGCGCCCGGCGCGGCACGCTCGAGACGCCGCACGGGCG CGTCGAGACCCCCGCCTTCATGCCGGTGGGCACGCGCGCCAGCGTCACCGGGCTCACCCCCGCCGACGTGCGCGAGGCGG GCGCCGAGGTCATCCTCGGCAACACCTACCACCTGCTGCTCCGCCCCGGGCCCGAGGCGTTCCGCGCGCTCGGCGGCATC CACCGCTTCATGCGCTGGGACGGCCCGATCCTCACCGACTCCGGCGGCTTCCAGATCTTCTCGCTCTCGCACGACCGCGT CATCACCGAGGCGGGCGCGCGCTTCCGCAGCTACGTGGACGGACGCCCGCAGCTCCTCACCCCCGAGTCCTCCATCGCGA TGCAGACCGCGATCGGCTCGGACGTGATGATGGTGCTCGACGTCTGCCTGCCCTCCACCGCCGAGGCGGCCGAGATCCGC GCCGCCATGGAGCGCACCCACCGCTGGGCGCTGCGCAGCCTGGCCGCGCGCACCAACCCCGAGCAGGCGCTCTTCGCCAT CGTCCAGGGCGGCCTCGACCCGGCGCTGCGCGCCGCCTCGGCCGGCTTCCTCACCCAGCACCCGTTCGACGGCTTCGCCA TCGGCGGGCTCGCGGTCGGCGACACCCGGGCCGAGCGCGGCGAGGTGGTGGCGCGCGCCGCCGAGCTGCTCCCGCTCGAT CGCCCGCGCTACCTCATGGGCGTGGGCACGCCGCCCGACCTCCTCGAGGCCATCGGCCACGGCGTGGACATGTTCGACTG CATCCTGCCCACCACGCTCGCCTGGCAGGGCACCGCCTTCACCTCCACCGGCCGCGTGCGCCTCACCCGCACCGAGCACC GGCTCTCCGAGCTCCCGCTCGACGCCGCCTGCGGCTGCGACACCTGCCGCGGCTGGAGCCGCGCCTACCTGCACCACCTG TTCAAGTGCCGCGAGCCCCTCGGGCCGCGCCTCGTGTCCGTCCACAACCTCCGCCACTACCTCGACCTCATGCGCGGCGC GCGCGCGGCCATCGAGGCCGGCCGCTACGGCGCCTACCAGCGCGAGCGGCTCGAGGCGCTCGACCGCCACGAGCACGACC GCAGCGCACGCCCACCGGGCCGCCGCCGCCTCCCCGAGCCGCCGCCGCCGACGCCCGCGGCCCCGCCGGCGGAGGCGCCG CGCGACGGCGCCCGCTTCCACCTCGTCGTCACGTCCCAGGGCGCGCCCGCGGTGCGCGACTCGGAGTCCGGCGAGGTGAT GCACCCGGTGATCGGCCCGGCGGTGGAGGCGGAGCGGCTGTACGTGGCCCAGTCGCGCCTCCGCGAGCGGCTCGCCGAGC CGGGGCCGCCGCTGGTGCTGCTCGACGTGGGGCTGGGCGCCGGCTCGAACGCGCTCGCCGCGATCCGCGCGGCCGGGGCG GTCCCGCCGGGCGGACGCGGCCTGGAGATCGTCAGCTTCGAGCGCGATCTCGGGGCGCTCGGGCTGGCGACGTCGGACGA GGGCGCGGCGCGGCTGGGCCTCGGGCCGGAGGACCTCGACGCGGCGCGGGCGCTCCTGCGCGACGGCGCCTGGGGCTCGG CGCGCGTGCGCTGGCGGATCGTCCTGGGCGACCTGCTGGAGACGCTGCCGCGGCAGGACCTCCGCGCCGAGGTGATCTTC TGGGATCCGTTCAGCCCGCGCGCGAACCCGGGCCTGTGGACGCTGGGGGCGTTCGCCGCCGCATGGGCGCGCTCCGGCCC GCGCTGCGCGCTGTACACGTACAGCACGGCCACCGCGACGCGCTCGGCCCTGCTCCTCGCCGGCTTCCACGTGGGCGTGG GCGACCCGAGCGGCCCGAAGGAGCAGACCACCGCGGCCGCGACGGATCCGGCGCTCCTGGCGCGCCCGCTCGACGCGCGC TGGCTGGCGCGGCTCGAGCGCTCCTCGGCGCCGTTCCCGCCGGACGCGCCTCCCGACGCGCTCGCGCGGGTGCGCGCGCA CCCGCAGTTCTCGGCGCGGCGCGAGGAGGAGGTCGCGTGA
Upstream 100 bases:
>100_bases GCCGTGGCGGTGGAGCGGGTCCTCAGGCTGCGCGGCACCTGGGAGGCCGGCTGCGCCGAGGCCGCGCACGGCCACCTCCC CCGCGCATAGGATCTGCCCG
Downstream 100 bases:
>100_bases CCGCCTACCGCCCGAGCCGCTGGCTCCCGGGCGCGCATGCCATAACCGTGTTCGCGAGCGTGGCGCGCCCGCTGCCGCGC CCGCCCGCCGTCCGCGAGCG
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MPFRFHPGPRDAETRARRGTLETPHGRVETPAFMPVGTRASVTGLTPADVREAGAEVILGNTYHLLLRPGPEAFRALGGI HRFMRWDGPILTDSGGFQIFSLSHDRVITEAGARFRSYVDGRPQLLTPESSIAMQTAIGSDVMMVLDVCLPSTAEAAEIR AAMERTHRWALRSLAARTNPEQALFAIVQGGLDPALRAASAGFLTQHPFDGFAIGGLAVGDTRAERGEVVARAAELLPLD RPRYLMGVGTPPDLLEAIGHGVDMFDCILPTTLAWQGTAFTSTGRVRLTRTEHRLSELPLDAACGCDTCRGWSRAYLHHL FKCREPLGPRLVSVHNLRHYLDLMRGARAAIEAGRYGAYQRERLEALDRHEHDRSARPPGRRRLPEPPPPTPAAPPAEAP RDGARFHLVVTSQGAPAVRDSESGEVMHPVIGPAVEAERLYVAQSRLRERLAEPGPPLVLLDVGLGAGSNALAAIRAAGA VPPGGRGLEIVSFERDLGALGLATSDEGAARLGLGPEDLDAARALLRDGAWGSARVRWRIVLGDLLETLPRQDLRAEVIF WDPFSPRANPGLWTLGAFAAAWARSGPRCALYTYSTATATRSALLLAGFHVGVGDPSGPKEQTTAAATDPALLARPLDAR WLARLERSSAPFPPDAPPDALARVRAHPQFSARREEEVA
Sequences:
>Translated_679_residues MPFRFHPGPRDAETRARRGTLETPHGRVETPAFMPVGTRASVTGLTPADVREAGAEVILGNTYHLLLRPGPEAFRALGGI HRFMRWDGPILTDSGGFQIFSLSHDRVITEAGARFRSYVDGRPQLLTPESSIAMQTAIGSDVMMVLDVCLPSTAEAAEIR AAMERTHRWALRSLAARTNPEQALFAIVQGGLDPALRAASAGFLTQHPFDGFAIGGLAVGDTRAERGEVVARAAELLPLD RPRYLMGVGTPPDLLEAIGHGVDMFDCILPTTLAWQGTAFTSTGRVRLTRTEHRLSELPLDAACGCDTCRGWSRAYLHHL FKCREPLGPRLVSVHNLRHYLDLMRGARAAIEAGRYGAYQRERLEALDRHEHDRSARPPGRRRLPEPPPPTPAAPPAEAP RDGARFHLVVTSQGAPAVRDSESGEVMHPVIGPAVEAERLYVAQSRLRERLAEPGPPLVLLDVGLGAGSNALAAIRAAGA VPPGGRGLEIVSFERDLGALGLATSDEGAARLGLGPEDLDAARALLRDGAWGSARVRWRIVLGDLLETLPRQDLRAEVIF WDPFSPRANPGLWTLGAFAAAWARSGPRCALYTYSTATATRSALLLAGFHVGVGDPSGPKEQTTAAATDPALLARPLDAR WLARLERSSAPFPPDAPPDALARVRAHPQFSARREEEVA >Mature_678_residues PFRFHPGPRDAETRARRGTLETPHGRVETPAFMPVGTRASVTGLTPADVREAGAEVILGNTYHLLLRPGPEAFRALGGIH RFMRWDGPILTDSGGFQIFSLSHDRVITEAGARFRSYVDGRPQLLTPESSIAMQTAIGSDVMMVLDVCLPSTAEAAEIRA AMERTHRWALRSLAARTNPEQALFAIVQGGLDPALRAASAGFLTQHPFDGFAIGGLAVGDTRAERGEVVARAAELLPLDR PRYLMGVGTPPDLLEAIGHGVDMFDCILPTTLAWQGTAFTSTGRVRLTRTEHRLSELPLDAACGCDTCRGWSRAYLHHLF KCREPLGPRLVSVHNLRHYLDLMRGARAAIEAGRYGAYQRERLEALDRHEHDRSARPPGRRRLPEPPPPTPAAPPAEAPR DGARFHLVVTSQGAPAVRDSESGEVMHPVIGPAVEAERLYVAQSRLRERLAEPGPPLVLLDVGLGAGSNALAAIRAAGAV PPGGRGLEIVSFERDLGALGLATSDEGAARLGLGPEDLDAARALLRDGAWGSARVRWRIVLGDLLETLPRQDLRAEVIFW DPFSPRANPGLWTLGAFAAAWARSGPRCALYTYSTATATRSALLLAGFHVGVGDPSGPKEQTTAAATDPALLARPLDARW LARLERSSAPFPPDAPPDALARVRAHPQFSARREEEVA
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=357, Percent_Identity=43.6974789915966, Blast_Score=298, Evalue=1e-80, Organism=Escherichia coli, GI1786607, Length=358, Percent_Identity=47.4860335195531, Blast_Score=342, Evalue=6e-95, Organism=Caenorhabditis elegans, GI17544680, Length=350, Percent_Identity=42.5714285714286, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI19920510, Length=347, Percent_Identity=42.9394812680115, Blast_Score=297, Evalue=1e-80, Organism=Drosophila melanogaster, GI21355311, Length=211, Percent_Identity=28.436018957346, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 73218; Mature: 73087
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRFHPGPRDAETRARRGTLETPHGRVETPAFMPVGTRASVTGLTPADVREAGAEVILG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEC NTYHLLLRPGPEAFRALGGIHRFMRWDGPILTDSGGFQIFSLSHDRVITEAGARFRSYVD CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHCC GRPQLLTPESSIAMQTAIGSDVMMVLDVCLPSTAEAAEIRAAMERTHRWALRSLAARTNP CCCCEECCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH EQALFAIVQGGLDPALRAASAGFLTQHPFDGFAIGGLAVGDTRAERGEVVARAAELLPLD HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHCCCC RPRYLMGVGTPPDLLEAIGHGVDMFDCILPTTLAWQGTAFTSTGRVRLTRTEHRLSELPL CCCEEEECCCCHHHHHHHHCCCHHHHHHHCHHHCCCCCEEECCCCEEEEEHHHHHHHCCC DAACGCDTCRGWSRAYLHHLFKCREPLGPRLVSVHNLRHYLDLMRGARAAIEAGRYGAYQ CHHCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RERLEALDRHEHDRSARPPGRRRLPEPPPPTPAAPPAEAPRDGARFHLVVTSQGAPAVRD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC SESGEVMHPVIGPAVEAERLYVAQSRLRERLAEPGPPLVLLDVGLGAGSNALAAIRAAGA CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCC VPPGGRGLEIVSFERDLGALGLATSDEGAARLGLGPEDLDAARALLRDGAWGSARVRWRI CCCCCCCEEEEEECCCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE VLGDLLETLPRQDLRAEVIFWDPFSPRANPGLWTLGAFAAAWARSGPRCALYTYSTATAT HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEECCHHHH RSALLLAGFHVGVGDPSGPKEQTTAAATDPALLARPLDARWLARLERSSAPFPPDAPPDA HHHHEEEEEEECCCCCCCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHH LARVRAHPQFSARREEEVA HHHHHCCCCHHCCHHHCCC >Mature Secondary Structure PFRFHPGPRDAETRARRGTLETPHGRVETPAFMPVGTRASVTGLTPADVREAGAEVILG CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEC NTYHLLLRPGPEAFRALGGIHRFMRWDGPILTDSGGFQIFSLSHDRVITEAGARFRSYVD CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHCC GRPQLLTPESSIAMQTAIGSDVMMVLDVCLPSTAEAAEIRAAMERTHRWALRSLAARTNP CCCCEECCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH EQALFAIVQGGLDPALRAASAGFLTQHPFDGFAIGGLAVGDTRAERGEVVARAAELLPLD HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHCCCC RPRYLMGVGTPPDLLEAIGHGVDMFDCILPTTLAWQGTAFTSTGRVRLTRTEHRLSELPL CCCEEEECCCCHHHHHHHHCCCHHHHHHHCHHHCCCCCEEECCCCEEEEEHHHHHHHCCC DAACGCDTCRGWSRAYLHHLFKCREPLGPRLVSVHNLRHYLDLMRGARAAIEAGRYGAYQ CHHCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RERLEALDRHEHDRSARPPGRRRLPEPPPPTPAAPPAEAPRDGARFHLVVTSQGAPAVRD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC SESGEVMHPVIGPAVEAERLYVAQSRLRERLAEPGPPLVLLDVGLGAGSNALAAIRAAGA CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCC VPPGGRGLEIVSFERDLGALGLATSDEGAARLGLGPEDLDAARALLRDGAWGSARVRWRI CCCCCCCEEEEEECCCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE VLGDLLETLPRQDLRAEVIFWDPFSPRANPGLWTLGAFAAAWARSGPRCALYTYSTATAT HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEECCHHHH RSALLLAGFHVGVGDPSGPKEQTTAAATDPALLARPLDARWLARLERSSAPFPPDAPPDA HHHHEEEEEEECCCCCCCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHH LARVRAHPQFSARREEEVA HHHHHCCCCHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]