| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917616
Identifier: 220917616
GI number: 220917616
Start: 2782395
End: 2783918
Strand: Direct
Name: 220917616
Synonym: A2cp1_2516
Alternate gene names: NA
Gene position: 2782395-2783918 (Clockwise)
Preceding gene: 220917612
Following gene: 220917618
Centisome position: 55.32
GC content: 74.54
Gene sequence:
>1524_bases ATGCTCGGACGAGGCGGGGCCTGGGTGGCGCTGGCGGCGGCGGTCGCGATCGCGGGCTGCGGCTCGGGCGGGAAGGATCC CGCGCCGGTCACGCCGCCCGGCGGCGGCGCCGGCGGAGGCGGAGGGGGCGGCGATGGGGGCGGCGGAGGAGGCGGCGGCG GCGGCGGGGGCGGCGGGACCACGCCGCCCCGCTTCCAGTTCGGGACGCAGGGGCCCTGGGCGGTGGAGAACGCCACCTAC GGCGCGAGCGCCGGCATCCAGGAGTCGCCGGTGGTCGGGTTCAGCACCGACGAGACGCAGAACCGGTGGCTGGCCACCCC GTCGGCGCTCTACCTGCTCCGGCCCGGCGAGACCACGTTCCGCCGCTACGACGAGGGCGACGGGCTGCACCTGGGCGCGA ACCGGATGCGGTACTGCCGCGACCGCCCGGTCCGCCCCGAGACGCCCTGCGCCGACGCCGACGTGAGCTGGGGCGTGGCG GCGCCCGAGGGCATCCGCTCGATCGTGGGCGGCGGGCCGGACGAGGTGTTCGTGGGGTACCACGGCATCCACCCGGGCGG CTCGGACTGCGGCGCCAACGGGGACGGCGAGGACTGGTGCGATCCCGACCGCCACAGCGGGAAGATCGACCGCGTCCGCC TGAACGCGGACGGGACGCTGGCGGTCGAGCGCTTCGACCTGGTCGCCGGGAACCACGGCGCGAAGTACTGGCACGACCGG TCCATCTACCGGATGGTCTACGACCACTTCGCCCATCCGCACACGCTGTACGCCGGCACCGAGCACGGCGTGGACCTGCT CTTCCCCGACCAGTTCCGCTGGCCGGATCCGCCCATGGAGTGGCTCGACTCCTTCAACGACGACTACATGGGCGACCACC TGCACGCCAGCGTCTGCAAGGACGCGCCCTGCGACGGCAGCGGCGCGAACCAGCGCCTCGGCGACTGGGCCGGCCTCGCC ATCGACGCGAACGGGGACCTGTGGCACGCCGGCAAGTGGGCCGCCGGCCTGATCACCTGGGACGCGGATCCGTTCCACTG GGTCGCCCGCAACGGCGCCGCGTTCAAGGTCGCGTTCGGCGACCCGTACTATCCCGACGGCACCGGCAACATGCCGGTGT TCCCGGTCGCGAACGAGGGACACGACGTCCTCATGACCGGCGTCGCGGTCTGCCCGGACGGCACGGTCTGGTTCTCGAGC GCCGGCCCGGCGGACGGGGTGATGGAGACGGTCGCCTCGTGGGACGGGCACCGCTTCACGCACTACCTGTCGAGCGCGCT CGGCCTGGGCGAGCGGCCGGTGCGCGACATCGCCTGCCTCCCCGACGGGCGGGTGGTGCTGGCGGGGTACACCACTGGTG TCTCGATCTGGGATCCGGCCACCCGGACGTCGAGGTCGATCCGCGCCGGGAGCGGCCTGCCGAGCGACCGGGTGACCGCG ATCGAGGTGGACCGGATGCCGTCGCCGCCCACGCTGCACGTCTCCACCGCCGGCGGCGCGGCGGCCATCCGCGTGCTGCC CTAG
Upstream 100 bases:
>100_bases GCGGTTCTCCGCGCGGCGGCGCGTCCCGGTCGCTGGCCCGGCGCTCGCACAGCGGGCCGCCGGTCCCGCGCGGCTCGCGG GCGGACTTCACGGAGGGGAG
Downstream 100 bases:
>100_bases CCTGGCCGCCCCGGCCCGGCCCGCTACGTGCGCGGGCGGGCCCCGGCGCGCCGGGCGGCGTCGGCGAGCACGTCGTACGG GCGGCAGCCGACCACCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MLGRGGAWVALAAAVAIAGCGSGGKDPAPVTPPGGGAGGGGGGGDGGGGGGGGGGGGGGTTPPRFQFGTQGPWAVENATY GASAGIQESPVVGFSTDETQNRWLATPSALYLLRPGETTFRRYDEGDGLHLGANRMRYCRDRPVRPETPCADADVSWGVA APEGIRSIVGGGPDEVFVGYHGIHPGGSDCGANGDGEDWCDPDRHSGKIDRVRLNADGTLAVERFDLVAGNHGAKYWHDR SIYRMVYDHFAHPHTLYAGTEHGVDLLFPDQFRWPDPPMEWLDSFNDDYMGDHLHASVCKDAPCDGSGANQRLGDWAGLA IDANGDLWHAGKWAAGLITWDADPFHWVARNGAAFKVAFGDPYYPDGTGNMPVFPVANEGHDVLMTGVAVCPDGTVWFSS AGPADGVMETVASWDGHRFTHYLSSALGLGERPVRDIACLPDGRVVLAGYTTGVSIWDPATRTSRSIRAGSGLPSDRVTA IEVDRMPSPPTLHVSTAGGAAAIRVLP
Sequences:
>Translated_507_residues MLGRGGAWVALAAAVAIAGCGSGGKDPAPVTPPGGGAGGGGGGGDGGGGGGGGGGGGGGTTPPRFQFGTQGPWAVENATY GASAGIQESPVVGFSTDETQNRWLATPSALYLLRPGETTFRRYDEGDGLHLGANRMRYCRDRPVRPETPCADADVSWGVA APEGIRSIVGGGPDEVFVGYHGIHPGGSDCGANGDGEDWCDPDRHSGKIDRVRLNADGTLAVERFDLVAGNHGAKYWHDR SIYRMVYDHFAHPHTLYAGTEHGVDLLFPDQFRWPDPPMEWLDSFNDDYMGDHLHASVCKDAPCDGSGANQRLGDWAGLA IDANGDLWHAGKWAAGLITWDADPFHWVARNGAAFKVAFGDPYYPDGTGNMPVFPVANEGHDVLMTGVAVCPDGTVWFSS AGPADGVMETVASWDGHRFTHYLSSALGLGERPVRDIACLPDGRVVLAGYTTGVSIWDPATRTSRSIRAGSGLPSDRVTA IEVDRMPSPPTLHVSTAGGAAAIRVLP >Mature_507_residues MLGRGGAWVALAAAVAIAGCGSGGKDPAPVTPPGGGAGGGGGGGDGGGGGGGGGGGGGGTTPPRFQFGTQGPWAVENATY GASAGIQESPVVGFSTDETQNRWLATPSALYLLRPGETTFRRYDEGDGLHLGANRMRYCRDRPVRPETPCADADVSWGVA APEGIRSIVGGGPDEVFVGYHGIHPGGSDCGANGDGEDWCDPDRHSGKIDRVRLNADGTLAVERFDLVAGNHGAKYWHDR SIYRMVYDHFAHPHTLYAGTEHGVDLLFPDQFRWPDPPMEWLDSFNDDYMGDHLHASVCKDAPCDGSGANQRLGDWAGLA IDANGDLWHAGKWAAGLITWDADPFHWVARNGAAFKVAFGDPYYPDGTGNMPVFPVANEGHDVLMTGVAVCPDGTVWFSS AGPADGVMETVASWDGHRFTHYLSSALGLGERPVRDIACLPDGRVVLAGYTTGVSIWDPATRTSRSIRAGSGLPSDRVTA IEVDRMPSPPTLHVSTAGGAAAIRVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52955; Mature: 52955
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGRGGAWVALAAAVAIAGCGSGGKDPAPVTPPGGGAGGGGGGGDGGGGGGGGGGGGGGT CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPRFQFGTQGPWAVENATYGASAGIQESPVVGFSTDETQNRWLATPSALYLLRPGETTF CCCCEECCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEECCCCHHH RRYDEGDGLHLGANRMRYCRDRPVRPETPCADADVSWGVAAPEGIRSIVGGGPDEVFVGY HCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEE HGIHPGGSDCGANGDGEDWCDPDRHSGKIDRVRLNADGTLAVERFDLVAGNHGAKYWHDR ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCH SIYRMVYDHFAHPHTLYAGTEHGVDLLFPDQFRWPDPPMEWLDSFNDDYMGDHLHASVCK HHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHC DAPCDGSGANQRLGDWAGLAIDANGDLWHAGKWAAGLITWDADPFHWVARNGAAFKVAFG CCCCCCCCCCCCCCCCCCEEEECCCCEEECCCEEEEEEEECCCCCEEEECCCCEEEEEEC DPYYPDGTGNMPVFPVANEGHDVLMTGVAVCPDGTVWFSSAGPADGVMETVASWDGHRFT CCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHH HYLSSALGLGERPVRDIACLPDGRVVLAGYTTGVSIWDPATRTSRSIRAGSGLPSDRVTA HHHHHHHCCCCCCCHHEEECCCCCEEEEEEECCCEEECCCCCCCCCEECCCCCCCCCEEE IEVDRMPSPPTLHVSTAGGAAAIRVLP EEECCCCCCCEEEEECCCCEEEEEECC >Mature Secondary Structure MLGRGGAWVALAAAVAIAGCGSGGKDPAPVTPPGGGAGGGGGGGDGGGGGGGGGGGGGGT CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPRFQFGTQGPWAVENATYGASAGIQESPVVGFSTDETQNRWLATPSALYLLRPGETTF CCCCEECCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEECCCCHHH RRYDEGDGLHLGANRMRYCRDRPVRPETPCADADVSWGVAAPEGIRSIVGGGPDEVFVGY HCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEE HGIHPGGSDCGANGDGEDWCDPDRHSGKIDRVRLNADGTLAVERFDLVAGNHGAKYWHDR ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCH SIYRMVYDHFAHPHTLYAGTEHGVDLLFPDQFRWPDPPMEWLDSFNDDYMGDHLHASVCK HHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHC DAPCDGSGANQRLGDWAGLAIDANGDLWHAGKWAAGLITWDADPFHWVARNGAAFKVAFG CCCCCCCCCCCCCCCCCCEEEECCCCEEECCCEEEEEEEECCCCCEEEECCCCEEEEEEC DPYYPDGTGNMPVFPVANEGHDVLMTGVAVCPDGTVWFSSAGPADGVMETVASWDGHRFT CCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHH HYLSSALGLGERPVRDIACLPDGRVVLAGYTTGVSIWDPATRTSRSIRAGSGLPSDRVTA HHHHHHHCCCCCCCHHEEECCCCCEEEEEEECCCEEECCCCCCCCCEECCCCCCCCCEEE IEVDRMPSPPTLHVSTAGGAAAIRVLP EEECCCCCCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA