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The map label for this gene is ygdL [H]

Identifier: 220917210

GI number: 220917210

Start: 2349308

End: 2350162

Strand: Direct

Name: ygdL [H]

Synonym: A2cp1_2107

Alternate gene names: 220917210

Gene position: 2349308-2350162 (Clockwise)

Preceding gene: 220917209

Following gene: 220917211

Centisome position: 46.71

GC content: 77.54

Gene sequence:

>855_bases
ATGGCCGGCGACCGCCCCGTCTCCCCCCGCCTCGATCGCACCGCGCGGCTGCTCGGGCTCGAGGCCATGGGCCGGCTGGC
GCGCGCGCACGTGGTGGTGCTGGGGATCGGGGGCGTCGGGACGGTCGCGGCCGAGGCGCTGTGCCGGGCCGGCGTCGGCC
GCCTCACGCTGGTGGACGGCGAGCGCGTCGAGGAGATGAACGCGAACCGCCAGCTCCACGCGCTCGACGGCGCGTTCGGC
GCGCCCAAGGCGGAGGCGCTGGCGGAGCGGCTCCGGCGCGTGATCCCGGGGGCGCGGGTGGACGCGGTGGTCGGGCGCTA
CGACGAGGGGAGCGCGGCGCGCCTCGTGCCGGAGGGCGTGTCCTGCGTGGTGGACGCGATGGACACGGTCGTCGCGAAGC
TGCACGTCATCGCGCGCTGCCTGGAGCACCGCATCCCCATCGTCACCTCGCTCGGCGCGGCGCGGCGGCTCGACCCCACC
GCGATCCAGGTGACGGACCTCTGCGAGACGCACACCGACCAGCTTGCCAAGGACGTGCGCAAGTACCTGCGCCGCCGCTT
CGGGATCTCGGCCACCGCGCCCACCGGCGTCACCGCGGTCTGGTCGATGGAGGCGCCGCGGCCGACGCTGGCGCTGCCCG
GCGACGAGGACGGCATCCCCGGCACGCGCCCGCGGCTGCCCGGGGAGCGGCGCCGCGAGCCGAAGTGCTACGGGAGCGCC
ATGTTCGTCACCGGCGCGTTCGGCCTCGCCGCGGCCGCGGCGGTGGTGCACGCGCTCGGCGGTGTGGCCCCGGTCGCGCC
GCGCACGCTGTCCGAGGCGGAGGCGAAGCGCCGGCGCAAGCCGCGCGCCCGGTGA

Upstream 100 bases:

>100_bases
CACCGGCGCGGCGGAGGCCGACGCGCTCACCACCGCGAACGCCCGCGCGCTGTTCCGGCTCGCTTGAGCGGCGCGCGAGG
CCGCGCTACACCGGGCCCGC

Downstream 100 bases:

>100_bases
CGCAGCGCGGGGACGCGGGCCGCGCGGCCGCGCGCACCGGGCGGCCGGTGCCCGGACGGCCGGGCGGCGAGGACGCGGCT
CGCGGGCCGCACGCGCACCG

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAGDRPVSPRLDRTARLLGLEAMGRLARAHVVVLGIGGVGTVAAEALCRAGVGRLTLVDGERVEEMNANRQLHALDGAFG
APKAEALAERLRRVIPGARVDAVVGRYDEGSAARLVPEGVSCVVDAMDTVVAKLHVIARCLEHRIPIVTSLGAARRLDPT
AIQVTDLCETHTDQLAKDVRKYLRRRFGISATAPTGVTAVWSMEAPRPTLALPGDEDGIPGTRPRLPGERRREPKCYGSA
MFVTGAFGLAAAAAVVHALGGVAPVAPRTLSEAEAKRRRKPRAR

Sequences:

>Translated_284_residues
MAGDRPVSPRLDRTARLLGLEAMGRLARAHVVVLGIGGVGTVAAEALCRAGVGRLTLVDGERVEEMNANRQLHALDGAFG
APKAEALAERLRRVIPGARVDAVVGRYDEGSAARLVPEGVSCVVDAMDTVVAKLHVIARCLEHRIPIVTSLGAARRLDPT
AIQVTDLCETHTDQLAKDVRKYLRRRFGISATAPTGVTAVWSMEAPRPTLALPGDEDGIPGTRPRLPGERRREPKCYGSA
MFVTGAFGLAAAAAVVHALGGVAPVAPRTLSEAEAKRRRKPRAR
>Mature_283_residues
AGDRPVSPRLDRTARLLGLEAMGRLARAHVVVLGIGGVGTVAAEALCRAGVGRLTLVDGERVEEMNANRQLHALDGAFGA
PKAEALAERLRRVIPGARVDAVVGRYDEGSAARLVPEGVSCVVDAMDTVVAKLHVIARCLEHRIPIVTSLGAARRLDPTA
IQVTDLCETHTDQLAKDVRKYLRRRFGISATAPTGVTAVWSMEAPRPTLALPGDEDGIPGTRPRLPGERRREPKCYGSAM
FVTGAFGLAAAAAVVHALGGVAPVAPRTLSEAEAKRRRKPRAR

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=262, Percent_Identity=40.4580152671756, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1787048, Length=184, Percent_Identity=32.0652173913043, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082356, Length=133, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321790, Length=208, Percent_Identity=26.9230769230769, Blast_Score=98, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6322825, Length=212, Percent_Identity=31.6037735849057, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 30140; Mature: 30009

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDRPVSPRLDRTARLLGLEAMGRLARAHVVVLGIGGVGTVAAEALCRAGVGRLTLVDG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCEEEEECC
ERVEEMNANRQLHALDGAFGAPKAEALAERLRRVIPGARVDAVVGRYDEGSAARLVPEGV
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHH
SCVVDAMDTVVAKLHVIARCLEHRIPIVTSLGAARRLDPTAIQVTDLCETHTDQLAKDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
KYLRRRFGISATAPTGVTAVWSMEAPRPTLALPGDEDGIPGTRPRLPGERRREPKCYGSA
HHHHHHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCHHCCH
MFVTGAFGLAAAAAVVHALGGVAPVAPRTLSEAEAKRRRKPRAR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGDRPVSPRLDRTARLLGLEAMGRLARAHVVVLGIGGVGTVAAEALCRAGVGRLTLVDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCEEEEECC
ERVEEMNANRQLHALDGAFGAPKAEALAERLRRVIPGARVDAVVGRYDEGSAARLVPEGV
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHH
SCVVDAMDTVVAKLHVIARCLEHRIPIVTSLGAARRLDPTAIQVTDLCETHTDQLAKDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
KYLRRRFGISATAPTGVTAVWSMEAPRPTLALPGDEDGIPGTRPRLPGERRREPKCYGSA
HHHHHHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCHHCCH
MFVTGAFGLAAAAAVVHALGGVAPVAPRTLSEAEAKRRRKPRAR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]