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The map label for this gene is alkB [C]

Identifier: 220917052

GI number: 220917052

Start: 2202879

End: 2203493

Strand: Reverse

Name: alkB [C]

Synonym: A2cp1_1948

Alternate gene names: 220917052

Gene position: 2203493-2202879 (Counterclockwise)

Preceding gene: 220917053

Following gene: 220917050

Centisome position: 43.81

GC content: 80.65

Gene sequence:

>615_bases
GTGAGCGGCGCGGCCGGGCGCGTTAACCTCTCCCGCGTGCAGCTCGAGCTGGTCCCCTCGCCCGTCCCGGCGTTGCCGCC
GGGCATGCGGCTGTGGCGCGCGCTGCTCCCCGCGGCGGAGCAGCAGGCGCTCCTGGCCGCGCTCGCCCGCCTGGAGCTCG
GCGAGGTCCGGATGCACGGGGTGATCGCGCGGCGGCGGGTGGCCCACTTCGGCCGTGCCTACGCGTACGATGCCCGCGCG
GTGCAGCCCGGCCCGCCGTTTCCGGCGGCGCTCGAGCCGCTGCGCCGGCGCGCGGCGGCGCTGGCCGGCGTGGCGCCCGC
TGCGCTCGCGGAGGCGCTGGTGACCCGCTATCCGCCCGGCGCCGGGATCGGCTGGCACCGCGACGCGCCGGCGTTCGGGC
AGGTGGTGGGCGTGTCGCTCGGCGCGCCGGCGCGCTTCCGGATGCGCGAGGGCGGCCCGGGCGGCCGGGCGCTCGAGGTG
CTGCTCGAGCCCGGCTCGGCCTACCTCCTCGCCGGCGCGGCGCGCTGGCGGTGGCAGCACGCCATCCCGCCGGTGCCCGC
CGAGCGCTGGTCCGTGACGTTCCGGACGCTGCGCGACGCGCCCCCGGCGCGGTGA

Upstream 100 bases:

>100_bases
CGCTGCCGCCGCGGGTGCGCTGGGTCTACGACCACCGGCCGGCGCCCGGCAGCCGCGAGGCGGCGCTCCTCGACGTGCTG
CGCGCGCCGCGCGAGTGGGC

Downstream 100 bases:

>100_bases
GGGCGCGCCGGCGCCGCGACGTCGCTACGCCTCCGGCGATCCGGTCGCCTCGCGGCGCGTGCGCCACAGCGAGTACGCCA
TCGCGCCGCCGAGCAGCGTC

Product: 2OG-Fe(II) oxygenase

Products: NA

Alternate protein names: Oxidoreductase 2og-Fe(Ii) Oxygenase Family; DNA Alkylation Damage Repair Protein AlkB

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSGAAGRVNLSRVQLELVPSPVPALPPGMRLWRALLPAAEQQALLAALARLELGEVRMHGVIARRRVAHFGRAYAYDARA
VQPGPPFPAALEPLRRRAAALAGVAPAALAEALVTRYPPGAGIGWHRDAPAFGQVVGVSLGAPARFRMREGGPGGRALEV
LLEPGSAYLLAGAARWRWQHAIPPVPAERWSVTFRTLRDAPPAR

Sequences:

>Translated_204_residues
MSGAAGRVNLSRVQLELVPSPVPALPPGMRLWRALLPAAEQQALLAALARLELGEVRMHGVIARRRVAHFGRAYAYDARA
VQPGPPFPAALEPLRRRAAALAGVAPAALAEALVTRYPPGAGIGWHRDAPAFGQVVGVSLGAPARFRMREGGPGGRALEV
LLEPGSAYLLAGAARWRWQHAIPPVPAERWSVTFRTLRDAPPAR
>Mature_203_residues
SGAAGRVNLSRVQLELVPSPVPALPPGMRLWRALLPAAEQQALLAALARLELGEVRMHGVIARRRVAHFGRAYAYDARAV
QPGPPFPAALEPLRRRAAALAGVAPAALAEALVTRYPPGAGIGWHRDAPAFGQVVGVSLGAPARFRMREGGPGGRALEVL
LEPGSAYLLAGAARWRWQHAIPPVPAERWSVTFRTLRDAPPAR

Specific function: Probably Involved In The Repair Of Alkylated DNA. Provides Extensive Resistance To Alkylating Agents Such As Mms And Dms (Sn2 Agents), But Not To Mmng And Mnu (Sn1 Agents). [C]

COG id: COG3145

COG function: function code L; Alkylated DNA repair protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21748; Mature: 21616

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAAGRVNLSRVQLELVPSPVPALPPGMRLWRALLPAAEQQALLAALARLELGEVRMHG
CCCCCCCEEHEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VIARRRVAHFGRAYAYDARAVQPGPPFPAALEPLRRRAAALAGVAPAALAEALVTRYPPG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
AGIGWHRDAPAFGQVVGVSLGAPARFRMREGGPGGRALEVLLEPGSAYLLAGAARWRWQH
CCCCCCCCCCCHHHHEEECCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHCC
AIPPVPAERWSVTFRTLRDAPPAR
CCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGAAGRVNLSRVQLELVPSPVPALPPGMRLWRALLPAAEQQALLAALARLELGEVRMHG
CCCCCCEEHEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VIARRRVAHFGRAYAYDARAVQPGPPFPAALEPLRRRAAALAGVAPAALAEALVTRYPPG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
AGIGWHRDAPAFGQVVGVSLGAPARFRMREGGPGGRALEVLLEPGSAYLLAGAARWRWQH
CCCCCCCCCCCHHHHEEECCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHCC
AIPPVPAERWSVTFRTLRDAPPAR
CCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA