| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is hemH [H]
Identifier: 220916324
GI number: 220916324
Start: 1367426
End: 1368388
Strand: Direct
Name: hemH [H]
Synonym: A2cp1_1218
Alternate gene names: 220916324
Gene position: 1367426-1368388 (Clockwise)
Preceding gene: 220916323
Following gene: 220916326
Centisome position: 27.19
GC content: 73.52
Gene sequence:
>963_bases ATGAGCCACACGGCCGTCTTCCTCATGAACCTCGGCGGGCCGAGGAACCTCGCGGAGGTCGAGCCGTACCTCTACGAGCT GTTCTCCGACCCGCTGGTGATCACGGCGCCGTTCGGCCCGTTCCGCAAGGTGATCGCGAAGCTCATCTCGCGCACGCGCG CGCCGTCCTCGGCGGAGAAGTACCAGCTCATCGGCGGGAAGTCGCCGCTGGTGGAGGGCACCGAGGCCCAGGCGCGCGCG CTCCAGGCCGCGCTCGGTCCCGGGTACTCGTGCCACCTGGCCATGCGCTGCGGGCACCCCAACACCGAGGAGGGCGTCCG CGAGGCGCTCGCCGCCGGGGCCACCCGCGCGGTGGCGCTGCCGCTGTACCCGCAGTACGCGAACGCCACCACGCTCAGCT CGCTCCTGGAGCTGCGCCGCCTCTGGCCGAAGGATCGTCCGCTCGCCGAGGTCTGCACCTGGCACGATCACGAGGGCTAC CTGGAGGCCTCGGCCGCGGCGCTGCGCGAGACGCTGGAGCGGGTCCCGGCCGCGCTGCGCGGGCGCACGCGCGTGGTGTT CAGCGCGCACGGCCTGCCCATGAGCCAGGTGCGCAAGGGCGACCCGTACCCCGGCTACGTGGAGCACTCCGCCCGCGAGA CCGCGCGCCGCGCCGGCGCCGCCGACTGGCAGCTCACCTACCAGAGCCGCGTCGGCCCGGCGAAGTGGCTCGGCCCGGAC ACCGTGAAGTACCTCGAGGCCAGCGCGAAGGACCTCGCCGTCGTGGCCGTGCCCATCGCGTTCGTCTCGGAGCACCTCGA GACGCTCTACGACATGGACATCCTCGCGAAGGAGGCCGCGGAGAAGGCCGGCGCGGCGGCGTACCTGCGCGTGCCCGCGC TCGGCACCCGCCCCGACTTCATCACCGCGCTCGCCGACGTGGTCCGCGAGGGAGAGAAGGCGTCGCGGACGGTGGCGGCG TAG
Upstream 100 bases:
>100_bases CCATGCTGTTCGACGCCTACCTGAAGAAGGAAGGCGGCAAGAAGCAGTTCTCGCGCACGGTGTAGCCGCGCGCGCGGGCG CGCCGCCGCCGGGGAGCCGC
Downstream 100 bases:
>100_bases CTCGGGCGTGGAGGGGCCTGCGGCGGTCGGGGACGGGTGCCCGGCCGCGGGGATCGGCTCACGAGATGCCCGAGGGTGGG ACGTGGGGCGCTGAGCGGAC
Product: Ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSHTAVFLMNLGGPRNLAEVEPYLYELFSDPLVITAPFGPFRKVIAKLISRTRAPSSAEKYQLIGGKSPLVEGTEAQARA LQAALGPGYSCHLAMRCGHPNTEEGVREALAAGATRAVALPLYPQYANATTLSSLLELRRLWPKDRPLAEVCTWHDHEGY LEASAAALRETLERVPAALRGRTRVVFSAHGLPMSQVRKGDPYPGYVEHSARETARRAGAADWQLTYQSRVGPAKWLGPD TVKYLEASAKDLAVVAVPIAFVSEHLETLYDMDILAKEAAEKAGAAAYLRVPALGTRPDFITALADVVREGEKASRTVAA
Sequences:
>Translated_320_residues MSHTAVFLMNLGGPRNLAEVEPYLYELFSDPLVITAPFGPFRKVIAKLISRTRAPSSAEKYQLIGGKSPLVEGTEAQARA LQAALGPGYSCHLAMRCGHPNTEEGVREALAAGATRAVALPLYPQYANATTLSSLLELRRLWPKDRPLAEVCTWHDHEGY LEASAAALRETLERVPAALRGRTRVVFSAHGLPMSQVRKGDPYPGYVEHSARETARRAGAADWQLTYQSRVGPAKWLGPD TVKYLEASAKDLAVVAVPIAFVSEHLETLYDMDILAKEAAEKAGAAAYLRVPALGTRPDFITALADVVREGEKASRTVAA >Mature_319_residues SHTAVFLMNLGGPRNLAEVEPYLYELFSDPLVITAPFGPFRKVIAKLISRTRAPSSAEKYQLIGGKSPLVEGTEAQARAL QAALGPGYSCHLAMRCGHPNTEEGVREALAAGATRAVALPLYPQYANATTLSSLLELRRLWPKDRPLAEVCTWHDHEGYL EASAAALRETLERVPAALRGRTRVVFSAHGLPMSQVRKGDPYPGYVEHSARETARRAGAADWQLTYQSRVGPAKWLGPDT VKYLEASAKDLAVVAVPIAFVSEHLETLYDMDILAKEAAEKAGAAAYLRVPALGTRPDFITALADVVREGEKASRTVAA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=324, Percent_Identity=34.8765432098765, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI60499025, Length=324, Percent_Identity=34.8765432098765, Blast_Score=164, Evalue=1e-40, Organism=Escherichia coli, GI1786681, Length=320, Percent_Identity=30, Blast_Score=97, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324750, Length=326, Percent_Identity=31.5950920245399, Blast_Score=161, Evalue=1e-40, Organism=Drosophila melanogaster, GI17864156, Length=336, Percent_Identity=30.952380952381, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24651774, Length=254, Percent_Identity=29.5275590551181, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI45552018, Length=197, Percent_Identity=31.9796954314721, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 34672; Mature: 34541
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTAVFLMNLGGPRNLAEVEPYLYELFSDPLVITAPFGPFRKVIAKLISRTRAPSSAEK CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHH YQLIGGKSPLVEGTEAQARALQAALGPGYSCHLAMRCGHPNTEEGVREALAAGATRAVAL EEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEE PLYPQYANATTLSSLLELRRLWPKDRPLAEVCTWHDHEGYLEASAAALRETLERVPAALR ECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC GRTRVVFSAHGLPMSQVRKGDPYPGYVEHSARETARRAGAADWQLTYQSRVGPAKWLGPD CCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCH TVKYLEASAKDLAVVAVPIAFVSEHLETLYDMDILAKEAAEKAGAAAYLRVPALGTRPDF HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH ITALADVVREGEKASRTVAA HHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure SHTAVFLMNLGGPRNLAEVEPYLYELFSDPLVITAPFGPFRKVIAKLISRTRAPSSAEK CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHH YQLIGGKSPLVEGTEAQARALQAALGPGYSCHLAMRCGHPNTEEGVREALAAGATRAVAL EEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEE PLYPQYANATTLSSLLELRRLWPKDRPLAEVCTWHDHEGYLEASAAALRETLERVPAALR ECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC GRTRVVFSAHGLPMSQVRKGDPYPGYVEHSARETARRAGAADWQLTYQSRVGPAKWLGPD CCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCH TVKYLEASAKDLAVVAVPIAFVSEHLETLYDMDILAKEAAEKAGAAAYLRVPALGTRPDF HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH ITALADVVREGEKASRTVAA HHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA