| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is otsB [H]
Identifier: 220916326
GI number: 220916326
Start: 1370493
End: 1371281
Strand: Direct
Name: otsB [H]
Synonym: A2cp1_1220
Alternate gene names: 220916326
Gene position: 1370493-1371281 (Clockwise)
Preceding gene: 220916324
Following gene: 220916327
Centisome position: 27.25
GC content: 76.3
Gene sequence:
>789_bases ATGAAGGATCTCCTCCACCCCCGCCACCGCGCCGCGCTCGACCGCTTCCTCGGCGAGGGGGCGCGCCGCCCCGTCCTGCT CGCCTTCGACTACGACGGCGTCCTCGCCCCCATCGTCAAGGATCCCGCCGGCGCCCGCATGCGCCCCTCCACCCGCACGC TCCTGGCGCGGGTGGCCGGGCTGTACCCGGTGGCGGTGGTCTCCGGTCGCGCCTGGCGCGACACCCACCGGTTCGTGGGC GACGTCGTCCCGACGGTGGTCGGCAACCACGGGTTCGAGCTCGGGCACCCGGTCCCGGTCCCGGCCCGCGTGCTGCGGAC GGTGCGCGGCTGGCGGCGGCAGCTCGAGGCGGCGCTGGAGGGGGTGCCGGGCGTCCACTTCGAGGACAAGCGCTCCACGC TCGCCATCCACTACGGGCTCACGCGTTCCTGGCGCCGCTCCGAGCACGCGGTGTACGAGGCCGCCAACCAGCTCGCCGGC ACCCGGCTCATCCCGGGCAAGAAGGTGCTGAACGTGCTCCCGCACGACTTCCCGTCGAAGGGCGACGCGGTGCGCGCGCT GCTCGCGCGGCTCGGCTGCGACGCGGCGCTCTACGCCGGCGACGACGTCACCGACGAGGACGCGTTCGCGGTGGGCGAGC CGCTCGTGTTCGGCGTGCACGTGGGCAGCGGGCGCACGCTCGCGCCCTGGTGCCTGCGCGCGCAGGAGGACGTGGACGCG TTGCTGGAGCGGCTGGTGGAGGCGCGCGCCGGGGCACGGCCGAGGCGCGCGGCGGGGCGGGCGCGGTGA
Upstream 100 bases:
>100_bases GCACGCGCCGATTGTACGTGCCTTCCCCGGCGAGACGAAGATCCCCGGCCGCACCGCGCGGGCCGACGCGCGGGAATGCT AGACTCCACGGCCCCGCGCC
Downstream 100 bases:
>100_bases GCCGGCCGAAGCCCCCCGGCGCCGGCGCCACCGGCGACCTGTTCGCGCGCGCCGCCGAGCGGGCCGCCGCGGAGCGCGTC CGCGCGGAGCCTCCCGCCGC
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: TPP; Trehalose-6-phosphate phosphatase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKDLLHPRHRAALDRFLGEGARRPVLLAFDYDGVLAPIVKDPAGARMRPSTRTLLARVAGLYPVAVVSGRAWRDTHRFVG DVVPTVVGNHGFELGHPVPVPARVLRTVRGWRRQLEAALEGVPGVHFEDKRSTLAIHYGLTRSWRRSEHAVYEAANQLAG TRLIPGKKVLNVLPHDFPSKGDAVRALLARLGCDAALYAGDDVTDEDAFAVGEPLVFGVHVGSGRTLAPWCLRAQEDVDA LLERLVEARAGARPRRAAGRAR
Sequences:
>Translated_262_residues MKDLLHPRHRAALDRFLGEGARRPVLLAFDYDGVLAPIVKDPAGARMRPSTRTLLARVAGLYPVAVVSGRAWRDTHRFVG DVVPTVVGNHGFELGHPVPVPARVLRTVRGWRRQLEAALEGVPGVHFEDKRSTLAIHYGLTRSWRRSEHAVYEAANQLAG TRLIPGKKVLNVLPHDFPSKGDAVRALLARLGCDAALYAGDDVTDEDAFAVGEPLVFGVHVGSGRTLAPWCLRAQEDVDA LLERLVEARAGARPRRAAGRAR >Mature_262_residues MKDLLHPRHRAALDRFLGEGARRPVLLAFDYDGVLAPIVKDPAGARMRPSTRTLLARVAGLYPVAVVSGRAWRDTHRFVG DVVPTVVGNHGFELGHPVPVPARVLRTVRGWRRQLEAALEGVPGVHFEDKRSTLAIHYGLTRSWRRSEHAVYEAANQLAG TRLIPGKKVLNVLPHDFPSKGDAVRALLARLGCDAALYAGDDVTDEDAFAVGEPLVFGVHVGSGRTLAPWCLRAQEDVDA LLERLVEARAGARPRRAAGRAR
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Drosophila melanogaster, GI221473368, Length=213, Percent_Identity=30.0469483568075, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI20129307, Length=213, Percent_Identity=30.0469483568075, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582490, Length=213, Percent_Identity=30.0469483568075, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19920676, Length=215, Percent_Identity=30.6976744186047, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 28618; Mature: 28618
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLLHPRHRAALDRFLGEGARRPVLLAFDYDGVLAPIVKDPAGARMRPSTRTLLARVAG CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEHHHHCCCCCCCCCCHHHHHHHHHHH LYPVAVVSGRAWRDTHRFVGDVVPTVVGNHGFELGHPVPVPARVLRTVRGWRRQLEAALE HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GVPGVHFEDKRSTLAIHYGLTRSWRRSEHAVYEAANQLAGTRLIPGKKVLNVLPHDFPSK CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC GDAVRALLARLGCDAALYAGDDVTDEDAFAVGEPLVFGVHVGSGRTLAPWCLRAQEDVDA CHHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCEEEEEEECCCCCHHHHHHCCHHHHHH LLERLVEARAGARPRRAAGRAR HHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKDLLHPRHRAALDRFLGEGARRPVLLAFDYDGVLAPIVKDPAGARMRPSTRTLLARVAG CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEHHHHCCCCCCCCCCHHHHHHHHHHH LYPVAVVSGRAWRDTHRFVGDVVPTVVGNHGFELGHPVPVPARVLRTVRGWRRQLEAALE HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GVPGVHFEDKRSTLAIHYGLTRSWRRSEHAVYEAANQLAGTRLIPGKKVLNVLPHDFPSK CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC GDAVRALLARLGCDAALYAGDDVTDEDAFAVGEPLVFGVHVGSGRTLAPWCLRAQEDVDA CHHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCEEEEEEECCCCCHHHHHHCCHHHHHH LLERLVEARAGARPRRAAGRAR HHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]