| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yceI [C]
Identifier: 220916102
GI number: 220916102
Start: 1115155
End: 1115706
Strand: Direct
Name: yceI [C]
Synonym: A2cp1_0989
Alternate gene names: 220916102
Gene position: 1115155-1115706 (Clockwise)
Preceding gene: 220916100
Following gene: 220916103
Centisome position: 22.17
GC content: 70.29
Gene sequence:
>552_bases ATGGCCACCACCCCCTGGAGCGTCGACGTCACCCACTCCGCCATCCACTTCTGGGTCCGCCACATGGTCATCTCCAAGGT GCACGGCCGGTTCGCCAGATGGACCGGCACCCTGGAGCTCGATCCGCAGGACCTCACCGGCGCGAAGGTGGACGTGAAGA TCGACGCCGCCTCCATCGACACCCAGGTCGCCGACCGCGACACGCACCTGCGCTCGGCGGACTTCCTCGACGTCGCGAAG TACCCGGAGCTCACGTTCCGCTCGCGGCGCATCGAGAAGGCCGGCGACGGCTACCGGGTGGTGGGCGACCTCACCCTGCA CGGCGTGACGCGCGAGGTGACGCTGGACGCCGAGTTCGCCGGCATCGGCAAGGACCCCTGGGGCAACGAGCGCGCCGGCT TCTCGGCGAAGGCCGCGCTCGACCGCAAGGCGTTCGGGCTGGCGTGGAACGCGGCGCTCGAGACCGGCGGCGTGCTGGTG GGGGAGAAGGTGGAGATCACGATCGAGCTCGAGGCGGTGAAGCAGGCCGCGAAGCAGTCGGACGCGGCGTAG
Upstream 100 bases:
>100_bases CGCCATGAACGGAACGGTATCAGATTCCTCCCGTCAGCGAGGAGCCGACCCGCGAGAACCGCGCGGAACCTTCACGAATC GAAGCAGAAAGGAATCCGAC
Downstream 100 bases:
>100_bases GCCGCGGCACGTGGGAGGCGCGATGGAGCGGCAGGGCGCGGGGCGGCGGATGCCGGTGCTGTTCGTGGGGCACGGCTCGC CCATGAACGCGATCGAGGAC
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MATTPWSVDVTHSAIHFWVRHMVISKVHGRFARWTGTLELDPQDLTGAKVDVKIDAASIDTQVADRDTHLRSADFLDVAK YPELTFRSRRIEKAGDGYRVVGDLTLHGVTREVTLDAEFAGIGKDPWGNERAGFSAKAALDRKAFGLAWNAALETGGVLV GEKVEITIELEAVKQAAKQSDAA
Sequences:
>Translated_183_residues MATTPWSVDVTHSAIHFWVRHMVISKVHGRFARWTGTLELDPQDLTGAKVDVKIDAASIDTQVADRDTHLRSADFLDVAK YPELTFRSRRIEKAGDGYRVVGDLTLHGVTREVTLDAEFAGIGKDPWGNERAGFSAKAALDRKAFGLAWNAALETGGVLV GEKVEITIELEAVKQAAKQSDAA >Mature_182_residues ATTPWSVDVTHSAIHFWVRHMVISKVHGRFARWTGTLELDPQDLTGAKVDVKIDAASIDTQVADRDTHLRSADFLDVAKY PELTFRSRRIEKAGDGYRVVGDLTLHGVTREVTLDAEFAGIGKDPWGNERAGFSAKAALDRKAFGLAWNAALETGGVLVG EKVEITIELEAVKQAAKQSDAA
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=164, Percent_Identity=40.8536585365854, Blast_Score=135, Evalue=2e-33,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 19986; Mature: 19854
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTPWSVDVTHSAIHFWVRHMVISKVHGRFARWTGTLELDPQDLTGAKVDVKIDAASID CCCCCCEEECHHHHHHHHHHHHHHHHHCCCEEHEEEEEEECCCCCCCCEEEEEEECCCCC TQVADRDTHLRSADFLDVAKYPELTFRSRRIEKAGDGYRVVGDLTLHGVTREVTLDAEFA CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEECEEEEEEECCEEC GIGKDPWGNERAGFSAKAALDRKAFGLAWNAALETGGVLVGEKVEITIELEAVKQAAKQS CCCCCCCCCCCCCCCHHHHHCCHHHCEEEECHHCCCCEEECCEEEEEEEHHHHHHHHHHC DAA CCC >Mature Secondary Structure ATTPWSVDVTHSAIHFWVRHMVISKVHGRFARWTGTLELDPQDLTGAKVDVKIDAASID CCCCCEEECHHHHHHHHHHHHHHHHHCCCEEHEEEEEEECCCCCCCCEEEEEEECCCCC TQVADRDTHLRSADFLDVAKYPELTFRSRRIEKAGDGYRVVGDLTLHGVTREVTLDAEFA CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEECEEEEEEECCEEC GIGKDPWGNERAGFSAKAALDRKAFGLAWNAALETGGVLVGEKVEITIELEAVKQAAKQS CCCCCCCCCCCCCCCHHHHHCCHHHCEEEECHHCCCCEEECCEEEEEEEHHHHHHHHHHC DAA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA