Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 220916100

GI number: 220916100

Start: 1113336

End: 1114145

Strand: Direct

Name: soj [H]

Synonym: A2cp1_0987

Alternate gene names: 220916100

Gene position: 1113336-1114145 (Clockwise)

Preceding gene: 220916099

Following gene: 220916102

Centisome position: 22.14

GC content: 76.05

Gene sequence:

>810_bases
ATGCGGCGGATCGCGTTCATCAACGAGAAGGGCGGTACCTGCAAGACCACGCTGTGCGTGCACGTGGCGGCGCGGCTCGC
GGCGCGCGGGCTGCGCGTGCTGGTGGCCGACCTCGACACGCAGGGCCACGCCGGGAAGTCGCTCGGCGTGGACGTGCGCG
GCCTGTCGCCCACCGTCCACGAGTGGCTGCTCGACGACGCGGTGCCGCTCGAGCGGGTGGTCCGGCCCACCGCGGTGGCC
GGCCTCGACCTGCTGCCCGCGAACAAGGACCTGGCCGGCTTCCCGGTGGCGGTGGCCGCGGCGGCGGATCGCGCCGAGCG
GCTCGATCGACGGCTCGCCACGGTGGGCGAGGACCGGTACGACGCGGTGCTCATCGACGCGCCGCCCTCGCTGTCGCTCG
TGACCGAGAACGTGCTGCGCGCCGCGCGCGAGCTGGTGGTGCCGGTCGCGCTCACCTACCTCGCGCTCGACGGGTGCGCC
GAGATCGTCCAGAGCCTGGAGCGGCTCCGGGCCGAGCGCGGCGCGGCGCCGGCCATCGCGCTGGTGGTGCCCACGCTGTA
CCGGAAGACGCAGCTCGCCGACGAGATCCTGGCGAAGCTGCGCGAGCGGTTCCCGGGGGAGCTGTCGCGGACCGTGCTGG
GCTGGTCGGTGAAGGTGGACGAGGCGCAGAGCCACGGCCGGACCGTGTTCGAGCACGCGCCCCGGTCGAGCGGCGCGGCC
GCGCTCGCCGCGATCGGCGACGAGGTGCTGGCGCGCGCGCCCGCACCGGCCGGCGTCACGGCAGCGGCGGCCCGAGCGGC
CGGCTCCTGA

Upstream 100 bases:

>100_bases
GCTCTCCGAGCGCGTGGACCGCGGCGGCCCGGACCGCGGCGGCCCGGACCGCGGCGGGCCCGGTCCGGAGTAGCGCGCCG
GCGGGGGGGACGTGGCCGGC

Downstream 100 bases:

>100_bases
CGAGCTCCAGCACGAGGTCGCGGAACGCGCTCACCTTGCGCGGGACGTGGCGCGTCGCGGGCGTCACCACGTAGAGGTTG
CCGCCGCTCCGCACCAGGCG

Product: Cobyrinic acid ac-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRRIAFINEKGGTCKTTLCVHVAARLAARGLRVLVADLDTQGHAGKSLGVDVRGLSPTVHEWLLDDAVPLERVVRPTAVA
GLDLLPANKDLAGFPVAVAAAADRAERLDRRLATVGEDRYDAVLIDAPPSLSLVTENVLRAARELVVPVALTYLALDGCA
EIVQSLERLRAERGAAPAIALVVPTLYRKTQLADEILAKLRERFPGELSRTVLGWSVKVDEAQSHGRTVFEHAPRSSGAA
ALAAIGDEVLARAPAPAGVTAAAARAAGS

Sequences:

>Translated_269_residues
MRRIAFINEKGGTCKTTLCVHVAARLAARGLRVLVADLDTQGHAGKSLGVDVRGLSPTVHEWLLDDAVPLERVVRPTAVA
GLDLLPANKDLAGFPVAVAAAADRAERLDRRLATVGEDRYDAVLIDAPPSLSLVTENVLRAARELVVPVALTYLALDGCA
EIVQSLERLRAERGAAPAIALVVPTLYRKTQLADEILAKLRERFPGELSRTVLGWSVKVDEAQSHGRTVFEHAPRSSGAA
ALAAIGDEVLARAPAPAGVTAAAARAAGS
>Mature_269_residues
MRRIAFINEKGGTCKTTLCVHVAARLAARGLRVLVADLDTQGHAGKSLGVDVRGLSPTVHEWLLDDAVPLERVVRPTAVA
GLDLLPANKDLAGFPVAVAAAADRAERLDRRLATVGEDRYDAVLIDAPPSLSLVTENVLRAARELVVPVALTYLALDGCA
EIVQSLERLRAERGAAPAIALVVPTLYRKTQLADEILAKLRERFPGELSRTVLGWSVKVDEAQSHGRTVFEHAPRSSGAA
ALAAIGDEVLARAPAPAGVTAAAARAAGS

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28314; Mature: 28314

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIAFINEKGGTCKTTLCVHVAARLAARGLRVLVADLDTQGHAGKSLGVDVRGLSPTVH
CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHH
EWLLDDAVPLERVVRPTAVAGLDLLPANKDLAGFPVAVAAAADRAERLDRRLATVGEDRY
HHHHHCCCCHHHHHCHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
DAVLIDAPPSLSLVTENVLRAARELVVPVALTYLALDGCAEIVQSLERLRAERGAAPAIA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVVPTLYRKTQLADEILAKLRERFPGELSRTVLGWSVKVDEAQSHGRTVFEHAPRSSGAA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCHHHCCCHHHHHCCCCCCCH
ALAAIGDEVLARAPAPAGVTAAAARAAGS
HHHHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRRIAFINEKGGTCKTTLCVHVAARLAARGLRVLVADLDTQGHAGKSLGVDVRGLSPTVH
CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHH
EWLLDDAVPLERVVRPTAVAGLDLLPANKDLAGFPVAVAAAADRAERLDRRLATVGEDRY
HHHHHCCCCHHHHHCHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
DAVLIDAPPSLSLVTENVLRAARELVVPVALTYLALDGCAEIVQSLERLRAERGAAPAIA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVVPTLYRKTQLADEILAKLRERFPGELSRTVLGWSVKVDEAQSHGRTVFEHAPRSSGAA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCHHHCCCHHHHHCCCCCCCH
ALAAIGDEVLARAPAPAGVTAAAARAAGS
HHHHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]