| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905326
Identifier: 220905326
GI number: 220905326
Start: 2484317
End: 2485723
Strand: Direct
Name: 220905326
Synonym: Ddes_2064
Alternate gene names: NA
Gene position: 2484317-2485723 (Clockwise)
Preceding gene: 220905325
Following gene: 220905327
Centisome position: 86.46
GC content: 60.84
Gene sequence:
>1407_bases ATGAAGCTCAAAAGCATCCCCCGCAGGCTCGGGTACATTCTGGGTGCGCAATGGACGCGCGACCTGGCATGGACGGCCTT TACCATATTGCTGGCCCGCCGCAGCCCGGATATTATGGGTCAGATCGTGTTGGCCCTCACGTTTGGCTATCTGGTGAAAA CCATTGCCGATGTGGGGCTTAACGATTTTCTGCTGTCCACCTTCGCCCGGCGTGAGGGCCGCCCCCGGGCGCTGCTCGGC GAGGTTACATGGCTCAAGCTTGTTGTGCTGGTGCTGGCGCTGGTCACCACATGGCTGGTGACAGGCTGGCAGAACTACAG CCCGGAACTGCGCCTCATCGTGCTCTGCATTGCTGCAGGCCTCGGCCTCGACGGCGTCAGCGACTCCTTTTTTGCCCTGT GCCAGGCCCGTGGGCGGCAGGATGTCGAAATGCGCATCCGTGTGCCGTCGGCCCTCATCGGCATCGGCTTTGGTATTGCC TGCGTGGTGATGGGCGCCCCGCCCATTGTCATCGCCTTGTACAAGCCCATCGAGTCCGTGCTCTGCATCATCTTCGCGCT GGTAGCGCTGGGGCGCAATCCCCTGACCGGCGTCGGCAAGGCCGGTATGCTTGACCTTGCACGCCAGATGAAACACGGCC TTATTTTTACCTGCATGGCCGCCTGCGCCATGTTCTACAACAAGATCAACGTTATTTTTCTCAAACAGTACGGCGGCAAT GCCGATGTGGGCGGTTACGGCGTTGCCTGGGAAACCATTGAGGGGCTGTCGGTTCTGGTTTCCAGCGCCCTGCTGGGCAA GGTCATATTTCCCCTGCTGGCCAGGCACTGGCAGCAAGATCGGGCAGCCTTCAGCCAGCTGTCCGGCCAGACCGCCCGGA CACTCTGGGCCGCAGCCCTGCCCATAATTTTTCTTATCTGTGTGGAAAGTGACCGTTTTTTGCCCTTCATCTACGGGCAG AACTATGAAAGCGCCGTCCGCGCCCAGCAACTGCTCACCCCGTGCCTGGCTACAGCCTTTCTGCACAATCTGGCAGCCTA TGCCATGATAGGCATGCGCCGCCACCGGCTGCTGCTGGCCTTTTATGTGAGCGGACTTGTACTCAACATCATCTGCTGCT TTACGCTCATTCCGGCCATGCCGCTGGAAGGCGCTGCCCTGTCTCTGACCATCACCAAGGTGTGGGTCGCCATTCTGACG GTGGGTTTTTTCCAGTGGGCCGCCCGCCCAATGAGCGCAGGGCAATGGCTGCTTATGCTGGCGGCCATTATGGTGAGCCT GGCCCTGTGGTGGCTCACCGGCAAGATGGCCCCGCGCGAGGTGGCAGAACTTGTCGGGCTTGTTCCCCTGCTGGCCCTTT TCTGGCGCTGGCGGCCGCCGCCGCCCTTTGAAAAAAAGGCGGCCTGA
Upstream 100 bases:
>100_bases CTATTACACGGTGGAGATCACTGTTCCCAACCCTGATCTGGAACTCAAGCCCGGCTTCAAGGCCGTTGTGCGTTTCGGGG GCGGCAGGTAAAGCCGAGGC
Downstream 100 bases:
>100_bases CCCGCCCATCCGCTTTCCGGCGCACCGTACGCCTGAACAACTCTGCCTGCACGGTTGCAACAAAGGACCATCGCAACAAC TGCCGCGCCGCCGGCATCGC
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKLKSIPRRLGYILGAQWTRDLAWTAFTILLARRSPDIMGQIVLALTFGYLVKTIADVGLNDFLLSTFARREGRPRALLG EVTWLKLVVLVLALVTTWLVTGWQNYSPELRLIVLCIAAGLGLDGVSDSFFALCQARGRQDVEMRIRVPSALIGIGFGIA CVVMGAPPIVIALYKPIESVLCIIFALVALGRNPLTGVGKAGMLDLARQMKHGLIFTCMAACAMFYNKINVIFLKQYGGN ADVGGYGVAWETIEGLSVLVSSALLGKVIFPLLARHWQQDRAAFSQLSGQTARTLWAAALPIIFLICVESDRFLPFIYGQ NYESAVRAQQLLTPCLATAFLHNLAAYAMIGMRRHRLLLAFYVSGLVLNIICCFTLIPAMPLEGAALSLTITKVWVAILT VGFFQWAARPMSAGQWLLMLAAIMVSLALWWLTGKMAPREVAELVGLVPLLALFWRWRPPPPFEKKAA
Sequences:
>Translated_468_residues MKLKSIPRRLGYILGAQWTRDLAWTAFTILLARRSPDIMGQIVLALTFGYLVKTIADVGLNDFLLSTFARREGRPRALLG EVTWLKLVVLVLALVTTWLVTGWQNYSPELRLIVLCIAAGLGLDGVSDSFFALCQARGRQDVEMRIRVPSALIGIGFGIA CVVMGAPPIVIALYKPIESVLCIIFALVALGRNPLTGVGKAGMLDLARQMKHGLIFTCMAACAMFYNKINVIFLKQYGGN ADVGGYGVAWETIEGLSVLVSSALLGKVIFPLLARHWQQDRAAFSQLSGQTARTLWAAALPIIFLICVESDRFLPFIYGQ NYESAVRAQQLLTPCLATAFLHNLAAYAMIGMRRHRLLLAFYVSGLVLNIICCFTLIPAMPLEGAALSLTITKVWVAILT VGFFQWAARPMSAGQWLLMLAAIMVSLALWWLTGKMAPREVAELVGLVPLLALFWRWRPPPPFEKKAA >Mature_468_residues MKLKSIPRRLGYILGAQWTRDLAWTAFTILLARRSPDIMGQIVLALTFGYLVKTIADVGLNDFLLSTFARREGRPRALLG EVTWLKLVVLVLALVTTWLVTGWQNYSPELRLIVLCIAAGLGLDGVSDSFFALCQARGRQDVEMRIRVPSALIGIGFGIA CVVMGAPPIVIALYKPIESVLCIIFALVALGRNPLTGVGKAGMLDLARQMKHGLIFTCMAACAMFYNKINVIFLKQYGGN ADVGGYGVAWETIEGLSVLVSSALLGKVIFPLLARHWQQDRAAFSQLSGQTARTLWAAALPIIFLICVESDRFLPFIYGQ NYESAVRAQQLLTPCLATAFLHNLAAYAMIGMRRHRLLLAFYVSGLVLNIICCFTLIPAMPLEGAALSLTITKVWVAILT VGFFQWAARPMSAGQWLLMLAAIMVSLALWWLTGKMAPREVAELVGLVPLLALFWRWRPPPPFEKKAA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51470; Mature: 51470
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKSIPRRLGYILGAQWTRDLAWTAFTILLARRSPDIMGQIVLALTFGYLVKTIADVGL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH NDFLLSTFARREGRPRALLGEVTWLKLVVLVLALVTTWLVTGWQNYSPELRLIVLCIAAG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC LGLDGVSDSFFALCQARGRQDVEMRIRVPSALIGIGFGIACVVMGAPPIVIALYKPIESV CCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LCIIFALVALGRNPLTGVGKAGMLDLARQMKHGLIFTCMAACAMFYNKINVIFLKQYGGN HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ADVGGYGVAWETIEGLSVLVSSALLGKVIFPLLARHWQQDRAAFSQLSGQTARTLWAAAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH PIIFLICVESDRFLPFIYGQNYESAVRAQQLLTPCLATAFLHNLAAYAMIGMRRHRLLLA HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYVSGLVLNIICCFTLIPAMPLEGAALSLTITKVWVAILTVGFFQWAARPMSAGQWLLML HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AAIMVSLALWWLTGKMAPREVAELVGLVPLLALFWRWRPPPPFEKKAA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLKSIPRRLGYILGAQWTRDLAWTAFTILLARRSPDIMGQIVLALTFGYLVKTIADVGL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH NDFLLSTFARREGRPRALLGEVTWLKLVVLVLALVTTWLVTGWQNYSPELRLIVLCIAAG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC LGLDGVSDSFFALCQARGRQDVEMRIRVPSALIGIGFGIACVVMGAPPIVIALYKPIESV CCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LCIIFALVALGRNPLTGVGKAGMLDLARQMKHGLIFTCMAACAMFYNKINVIFLKQYGGN HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ADVGGYGVAWETIEGLSVLVSSALLGKVIFPLLARHWQQDRAAFSQLSGQTARTLWAAAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH PIIFLICVESDRFLPFIYGQNYESAVRAQQLLTPCLATAFLHNLAAYAMIGMRRHRLLLA HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYVSGLVLNIICCFTLIPAMPLEGAALSLTITKVWVAILTVGFFQWAARPMSAGQWLLML HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AAIMVSLALWWLTGKMAPREVAELVGLVPLLALFWRWRPPPPFEKKAA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA