| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905325
Identifier: 220905325
GI number: 220905325
Start: 2483363
End: 2484307
Strand: Direct
Name: 220905325
Synonym: Ddes_2063
Alternate gene names: NA
Gene position: 2483363-2484307 (Clockwise)
Preceding gene: 220905324
Following gene: 220905326
Centisome position: 86.42
GC content: 58.1
Gene sequence:
>945_bases ATGCAACGCCTTGCCCGTCTACGCTTTTTCGCCGCGCCCGGCCTGTTTCTGACACTGGTCCTGCTGTGCAGCCTGGCATT CGCTGCCGCTGCCTCCGCGGCCGAAGGCGGCAAAAGCGGCGTGACCATCCTTACCGGCAAAGTGGTGACTACTGTTATGC GCGCCATACCCATGCCCTTTAACGGGGTGGTGGATGATGTGCTTGTCAAACCCGGCGAAGCCGTTGAAGAAAATGCCCCG CTCATGCGCTATCACCTGCACGAAGACGCCGAACGCGCCTTGCAGCGCGAAGTTATGCAGGGGCCCGGCACAGAAAGCCT CAAGAGCCAGGTGCTTGACCTTGAACGCAAACTGGCCGAAACCATCGCCCAGCGCAACAAGGCGCGTCAGCTTGCCGCCT CGGGCCTTGGCTCCCGTCAGGCTTCCGGCCGCCTTGAAGAAGACGTAACCTCTTTGCAGCGCCGTATCGAACTCACCACC ACTACCATCAAAAAAGCTGAGAACAGCTTTGCCATTCGCCTCAAGGAACTGAGCAGCTATTTTGGTCAGGAAATCAGGGA GGGCGAAATCCTGCCTGAAACCCTCACCCTGACCTCCCCCATCAAGGGTTATGTGCTCTCGCTTGACGCCACCCTCAATC CCGGCACCCTGCTGCAGGCAGGGAGCATGCCCATCAGGGTAGGACAGCTTGACCCCGTGCTGATTCAGGTGCCTGTGTAC GAGGCCGAAATCAGCGGCATTTCGGAAGGGGATAAGGTAGACGTGGAGATTCCCTCGCTCGGCAACAAGGTATTTCCCGG CAAGGTCAATGAAATATCCTGGGTTTCCAATGACATGAGTGTCTCAAATCCGTCCTATTACACGGTGGAGATCACTGTTC CCAACCCTGATCTGGAACTCAAGCCCGGCTTCAAGGCCGTTGTGCGTTTCGGGGGCGGCAGGTAA
Upstream 100 bases:
>100_bases GCGCCGAGCTGTCCTGCGAGCTGGCCCAGCTTGAATGGATGTATCTTTCCACGGCCCTTCAGGAACATTTCCTCGGCCTG CCCGCCAAAGAGGTGCTGTA
Downstream 100 bases:
>100_bases AGCCGAGGCATGAAGCTCAAAAGCATCCCCCGCAGGCTCGGGTACATTCTGGGTGCGCAATGGACGCGCGACCTGGCATG GACGGCCTTTACCATATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MQRLARLRFFAAPGLFLTLVLLCSLAFAAAASAAEGGKSGVTILTGKVVTTVMRAIPMPFNGVVDDVLVKPGEAVEENAP LMRYHLHEDAERALQREVMQGPGTESLKSQVLDLERKLAETIAQRNKARQLAASGLGSRQASGRLEEDVTSLQRRIELTT TTIKKAENSFAIRLKELSSYFGQEIREGEILPETLTLTSPIKGYVLSLDATLNPGTLLQAGSMPIRVGQLDPVLIQVPVY EAEISGISEGDKVDVEIPSLGNKVFPGKVNEISWVSNDMSVSNPSYYTVEITVPNPDLELKPGFKAVVRFGGGR
Sequences:
>Translated_314_residues MQRLARLRFFAAPGLFLTLVLLCSLAFAAAASAAEGGKSGVTILTGKVVTTVMRAIPMPFNGVVDDVLVKPGEAVEENAP LMRYHLHEDAERALQREVMQGPGTESLKSQVLDLERKLAETIAQRNKARQLAASGLGSRQASGRLEEDVTSLQRRIELTT TTIKKAENSFAIRLKELSSYFGQEIREGEILPETLTLTSPIKGYVLSLDATLNPGTLLQAGSMPIRVGQLDPVLIQVPVY EAEISGISEGDKVDVEIPSLGNKVFPGKVNEISWVSNDMSVSNPSYYTVEITVPNPDLELKPGFKAVVRFGGGR >Mature_314_residues MQRLARLRFFAAPGLFLTLVLLCSLAFAAAASAAEGGKSGVTILTGKVVTTVMRAIPMPFNGVVDDVLVKPGEAVEENAP LMRYHLHEDAERALQREVMQGPGTESLKSQVLDLERKLAETIAQRNKARQLAASGLGSRQASGRLEEDVTSLQRRIELTT TTIKKAENSFAIRLKELSSYFGQEIREGEILPETLTLTSPIKGYVLSLDATLNPGTLLQAGSMPIRVGQLDPVLIQVPVY EAEISGISEGDKVDVEIPSLGNKVFPGKVNEISWVSNDMSVSNPSYYTVEITVPNPDLELKPGFKAVVRFGGGR
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33991; Mature: 33991
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLARLRFFAAPGLFLTLVLLCSLAFAAAASAAEGGKSGVTILTGKVVTTVMRAIPMPF CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCC NGVVDDVLVKPGEAVEENAPLMRYHLHEDAERALQREVMQGPGTESLKSQVLDLERKLAE CCHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TIAQRNKARQLAASGLGSRQASGRLEEDVTSLQRRIELTTTTIKKAENSFAIRLKELSSY HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHH FGQEIREGEILPETLTLTSPIKGYVLSLDATLNPGTLLQAGSMPIRVGQLDPVLIQVPVY HHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEEEEE EAEISGISEGDKVDVEIPSLGNKVFPGKVNEISWVSNDMSVSNPSYYTVEITVPNPDLEL HHHHCCCCCCCEEEEECCCCCCEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEE KPGFKAVVRFGGGR CCCHHHHHCCCCCC >Mature Secondary Structure MQRLARLRFFAAPGLFLTLVLLCSLAFAAAASAAEGGKSGVTILTGKVVTTVMRAIPMPF CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCC NGVVDDVLVKPGEAVEENAPLMRYHLHEDAERALQREVMQGPGTESLKSQVLDLERKLAE CCHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TIAQRNKARQLAASGLGSRQASGRLEEDVTSLQRRIELTTTTIKKAENSFAIRLKELSSY HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHH FGQEIREGEILPETLTLTSPIKGYVLSLDATLNPGTLLQAGSMPIRVGQLDPVLIQVPVY HHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEEEEE EAEISGISEGDKVDVEIPSLGNKVFPGKVNEISWVSNDMSVSNPSYYTVEITVPNPDLEL HHHHCCCCCCCEEEEECCCCCCEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEE KPGFKAVVRFGGGR CCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA