| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905047
Identifier: 220905047
GI number: 220905047
Start: 2154248
End: 2154943
Strand: Reverse
Name: 220905047
Synonym: Ddes_1784
Alternate gene names: NA
Gene position: 2154943-2154248 (Counterclockwise)
Preceding gene: 220905063
Following gene: 220905044
Centisome position: 75.0
GC content: 63.07
Gene sequence:
>696_bases ATGACCTGGGAATGGGCCGCGGCCGGCATTGTGTTTTTGCTGGTGGTGGTATTCAGCGTACGCCTGATGAAGCGTGGTCT TTTTACCCTGGAGGACGAGCGCGCCCTGTGTGAGGAGCGCATACGCCTTATGGAAGAAGAACTGCGCCAGGATCAGAAGA ATATGGCCTCCAGCGAGCATCTGCGTATCGCCCTGGCGGGCCTGCGTGACCTGCTGCGTCTGGCGGGGTATCCTCGCGGA TTCTGGATTGAGGTGACCGCGCGCGGGCAGGGAGAAGCCAGGGGAGAGGCCTTGCTGCTGCACACCCCCGGCGGAGACTG GCGCATAAGCCTGAGCATGCGTGAGCGGCAGTTGCGCGCCGTGCGCAAGGTGGCCCACGGGCAGGGGCGCTGGCATCTGT ACGGGCCAGAGCTTCATGAAGAATACACTGAACTGGCCCCGCTGATGTGCGCCCTGCATACGCATTTGCGGCAAAGGGAC GGCAGCGCGGCCGCCGGGTTCAATACCCCCGGCACCCTTGCCGTACCTACAGCATTTGCCGTCAGGGACGAAAACGGGGC TGCAAGCCCCCTATCCGATGCTCCCCCTGAAAAGCCCCATCTGGCTCGGCGTTTTGCTCGCCGGGCCGTCCACGTTGCCA TACGGAAAAAATCCCTTCCTCCGCCGCTCAAGCCGGGCAGACACCAGGACAAGTAA
Upstream 100 bases:
>100_bases CGGCCGGCCATAAAAGCGTGCAGAAGCAGCTTGACAGCCGGGGCCGCTGCAGTGACACTTTACAGGATATACCGGGCGGC AGCCCTGTGGCGGAGGATAT
Downstream 100 bases:
>100_bases TACTTGAAAAACAGTCCTTGGCCTGTGTCTGAAGTTCTTATGAAACAGCAATATGTCAATAAGTCGAAAGCCCATTGACC TGTGCAACCCCTCGCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTWEWAAAGIVFLLVVVFSVRLMKRGLFTLEDERALCEERIRLMEEELRQDQKNMASSEHLRIALAGLRDLLRLAGYPRG FWIEVTARGQGEARGEALLLHTPGGDWRISLSMRERQLRAVRKVAHGQGRWHLYGPELHEEYTELAPLMCALHTHLRQRD GSAAAGFNTPGTLAVPTAFAVRDENGAASPLSDAPPEKPHLARRFARRAVHVAIRKKSLPPPLKPGRHQDK
Sequences:
>Translated_231_residues MTWEWAAAGIVFLLVVVFSVRLMKRGLFTLEDERALCEERIRLMEEELRQDQKNMASSEHLRIALAGLRDLLRLAGYPRG FWIEVTARGQGEARGEALLLHTPGGDWRISLSMRERQLRAVRKVAHGQGRWHLYGPELHEEYTELAPLMCALHTHLRQRD GSAAAGFNTPGTLAVPTAFAVRDENGAASPLSDAPPEKPHLARRFARRAVHVAIRKKSLPPPLKPGRHQDK >Mature_230_residues TWEWAAAGIVFLLVVVFSVRLMKRGLFTLEDERALCEERIRLMEEELRQDQKNMASSEHLRIALAGLRDLLRLAGYPRGF WIEVTARGQGEARGEALLLHTPGGDWRISLSMRERQLRAVRKVAHGQGRWHLYGPELHEEYTELAPLMCALHTHLRQRDG SAAAGFNTPGTLAVPTAFAVRDENGAASPLSDAPPEKPHLARRFARRAVHVAIRKKSLPPPLKPGRHQDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26023; Mature: 25892
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWEWAAAGIVFLLVVVFSVRLMKRGLFTLEDERALCEERIRLMEEELRQDQKNMASSEH CCCCHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LRIALAGLRDLLRLAGYPRGFWIEVTARGQGEARGEALLLHTPGGDWRISLSMRERQLRA HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHH VRKVAHGQGRWHLYGPELHEEYTELAPLMCALHTHLRQRDGSAAAGFNTPGTLAVPTAFA HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEE VRDENGAASPLSDAPPEKPHLARRFARRAVHVAIRKKSLPPPLKPGRHQDK EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TWEWAAAGIVFLLVVVFSVRLMKRGLFTLEDERALCEERIRLMEEELRQDQKNMASSEH CCCHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LRIALAGLRDLLRLAGYPRGFWIEVTARGQGEARGEALLLHTPGGDWRISLSMRERQLRA HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHH VRKVAHGQGRWHLYGPELHEEYTELAPLMCALHTHLRQRDGSAAAGFNTPGTLAVPTAFA HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEE VRDENGAASPLSDAPPEKPHLARRFARRAVHVAIRKKSLPPPLKPGRHQDK EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA