| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is purR [H]
Identifier: 220905044
GI number: 220905044
Start: 2150206
End: 2151321
Strand: Reverse
Name: purR [H]
Synonym: Ddes_1781
Alternate gene names: 220905044
Gene position: 2151321-2150206 (Counterclockwise)
Preceding gene: 220905047
Following gene: 220905043
Centisome position: 74.87
GC content: 58.06
Gene sequence:
>1116_bases ATGACGATTGATGGCGGAAAGCAGGCCGAAACGGGCACAAAAAAGGCAACCCTTGCGGATGTGGCCCAGGCGGCGGAGGT GTCACCCGCCACGGTTTCAATGATTCTCAATGGCCGTGAAGGAGTTTCTTTTGCCGAGGATACAGTCAAGACGGTTCTGG CCGCGGCAGCAAAGCTCAACTACACCGGCGGCAGACGCGGCAGGGTACCCCCGGGAAGCAGGCCCGTCATACTGATTGCC GTGCCGAACGTAACGAACCCTTATTACGCCACGATTATTCAGGCCATTCAGCAGGCAGCGGAAAAAAAGAATTACGCCAC CTGCGTAAGCGCCACCTACCGCAGCCTGGAAAATGAGCTGGCGGCCTTGCAGCTGGCCCGTTCCACAGGCATGGCCGGTA TTATATTCGCCATGCTGGCGCACCCTGACGCCATACTGGCGCGCGCCGGGCGCAAGATGCCCCTGGTGGTTATGGGCGAC CGGCGCGTGGGCCTTAATGTAGATACGGTAGAGCTGAACAACTACGATGCGGGCAGTCTTATTGCCCAGCACATGTGCGA ACTGGGGCATAAGCACATGGCCTATATTTCCACATCGCTGGACACCTGTAACCCCATCAGGGTGCAGCGCCACAAGGGCC TGCAGGACACCTTGGCCCGGCTCTGCCCCGAAGGCCGCCTTGTGGTCAAAAGCCGCGATATTTCGCCTGAAACGGAACTG GAAAACCTGCTTATCGAGCACACCGTGGGCTACGAACTGGCCCGGGGCTGTTTTGACGACAAAAAGATCACGGCCTTTGT GGCCGTCAACGATATGGTGGCCTACGGGGTCATGGATGCCGTGATTGAAGCCGGTTTGAGCATCCCCGATGATTACAGCG TCTGCGGATTCGACAATCTCTGGCCCTCGCATTTTGCCCGTGTGTCTTTGACGACCATCGAGCATTATATCAATGACAAG GGGCATAATGCCCTGGACCTGCTGCATGCCAGAATCAGCGGGCAGCTCTCGAACCGGAATATAACCAGGGTCGAGGTCAG CCACAAACTTATTGCGCGCGCCTCTACCGGCGCTCCGCGTCGATCTTGGGCCGGACCTTCCGGCTCAGGATCGTAA
Upstream 100 bases:
>100_bases CGAAATGCCGGCATTGTGTGTCCCGCGTATTGCAGGTAAGAATGCTTCAGGCGTTATGCGTCCGTACAAACAGGATATGA ATGCCGGAAGGAAAGAAAAG
Downstream 100 bases:
>100_bases CGGCCTGTCTGCCTATGCATAGCCATTTGACTCGTCAGCAACTGGAAGCCCTTACCCTGCGTTGGGAACAGTGGGAAAGC GAGGCTGCCACCAGGGCGCA
Product: LacI family transcriptional regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTIDGGKQAETGTKKATLADVAQAAEVSPATVSMILNGREGVSFAEDTVKTVLAAAAKLNYTGGRRGRVPPGSRPVILIA VPNVTNPYYATIIQAIQQAAEKKNYATCVSATYRSLENELAALQLARSTGMAGIIFAMLAHPDAILARAGRKMPLVVMGD RRVGLNVDTVELNNYDAGSLIAQHMCELGHKHMAYISTSLDTCNPIRVQRHKGLQDTLARLCPEGRLVVKSRDISPETEL ENLLIEHTVGYELARGCFDDKKITAFVAVNDMVAYGVMDAVIEAGLSIPDDYSVCGFDNLWPSHFARVSLTTIEHYINDK GHNALDLLHARISGQLSNRNITRVEVSHKLIARASTGAPRRSWAGPSGSGS
Sequences:
>Translated_371_residues MTIDGGKQAETGTKKATLADVAQAAEVSPATVSMILNGREGVSFAEDTVKTVLAAAAKLNYTGGRRGRVPPGSRPVILIA VPNVTNPYYATIIQAIQQAAEKKNYATCVSATYRSLENELAALQLARSTGMAGIIFAMLAHPDAILARAGRKMPLVVMGD RRVGLNVDTVELNNYDAGSLIAQHMCELGHKHMAYISTSLDTCNPIRVQRHKGLQDTLARLCPEGRLVVKSRDISPETEL ENLLIEHTVGYELARGCFDDKKITAFVAVNDMVAYGVMDAVIEAGLSIPDDYSVCGFDNLWPSHFARVSLTTIEHYINDK GHNALDLLHARISGQLSNRNITRVEVSHKLIARASTGAPRRSWAGPSGSGS >Mature_370_residues TIDGGKQAETGTKKATLADVAQAAEVSPATVSMILNGREGVSFAEDTVKTVLAAAAKLNYTGGRRGRVPPGSRPVILIAV PNVTNPYYATIIQAIQQAAEKKNYATCVSATYRSLENELAALQLARSTGMAGIIFAMLAHPDAILARAGRKMPLVVMGDR RVGLNVDTVELNNYDAGSLIAQHMCELGHKHMAYISTSLDTCNPIRVQRHKGLQDTLARLCPEGRLVVKSRDISPETELE NLLIEHTVGYELARGCFDDKKITAFVAVNDMVAYGVMDAVIEAGLSIPDDYSVCGFDNLWPSHFARVSLTTIEHYINDKG HNALDLLHARISGQLSNRNITRVEVSHKLIARASTGAPRRSWAGPSGSGS
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787948, Length=358, Percent_Identity=26.8156424581006, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1789202, Length=307, Percent_Identity=27.0358306188925, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790194, Length=348, Percent_Identity=25.2873563218391, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790369, Length=333, Percent_Identity=27.027027027027, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788474, Length=328, Percent_Identity=25, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787580, Length=338, Percent_Identity=23.0769230769231, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI48994940, Length=289, Percent_Identity=24.5674740484429, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787906, Length=211, Percent_Identity=27.4881516587678, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 39949; Mature: 39818
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDGGKQAETGTKKATLADVAQAAEVSPATVSMILNGREGVSFAEDTVKTVLAAAAKLN CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC YTGGRRGRVPPGSRPVILIAVPNVTNPYYATIIQAIQQAAEKKNYATCVSATYRSLENEL CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AALQLARSTGMAGIIFAMLAHPDAILARAGRKMPLVVMGDRRVGLNVDTVELNNYDAGSL HHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCEECCCEEEEEECCCCHHHH IAQHMCELGHKHMAYISTSLDTCNPIRVQRHKGLQDTLARLCPEGRLVVKSRDISPETEL HHHHHHHHCCHHEEHEECCCCCCCCCHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHH ENLLIEHTVGYELARGCFDDKKITAFVAVNDMVAYGVMDAVIEAGLSIPDDYSVCGFDNL HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC WPSHFARVSLTTIEHYINDKGHNALDLLHARISGQLSNRNITRVEVSHKLIARASTGAPR CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCC RSWAGPSGSGS CCCCCCCCCCC >Mature Secondary Structure TIDGGKQAETGTKKATLADVAQAAEVSPATVSMILNGREGVSFAEDTVKTVLAAAAKLN CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC YTGGRRGRVPPGSRPVILIAVPNVTNPYYATIIQAIQQAAEKKNYATCVSATYRSLENEL CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AALQLARSTGMAGIIFAMLAHPDAILARAGRKMPLVVMGDRRVGLNVDTVELNNYDAGSL HHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCEECCCEEEEEECCCCHHHH IAQHMCELGHKHMAYISTSLDTCNPIRVQRHKGLQDTLARLCPEGRLVVKSRDISPETEL HHHHHHHHCCHHEEHEECCCCCCCCCHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHH ENLLIEHTVGYELARGCFDDKKITAFVAVNDMVAYGVMDAVIEAGLSIPDDYSVCGFDNL HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC WPSHFARVSLTTIEHYINDKGHNALDLLHARISGQLSNRNITRVEVSHKLIARASTGAPR CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCC RSWAGPSGSGS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA