Click here to switch to the map view.

The map label for this gene is 220903883

Identifier: 220903883

GI number: 220903883

Start: 734334

End: 734879

Strand: Reverse

Name: 220903883

Synonym: Ddes_0608

Alternate gene names: NA

Gene position: 734879-734334 (Counterclockwise)

Preceding gene: 220903884

Following gene: 220903882

Centisome position: 25.57

GC content: 56.04

Gene sequence:

>546_bases
ATGCGCAAGGTTTTGATGATGACCGTAGCGGTTTGCATGCTCATGGCCGGAGCGGCCCTTGCGGCTGACAGCAACGCCGT
GCCCGCCGCCAAGATTGGCGTAGTGGACATGCAAACTGTGGCCACGCAGAGCGAACCCGCCGAGGCCGCCAAAAAGCAGA
TGGAACAGAAGTTCGGCAAAGAACGCGCCGAACTGGAAAAGCAGGGCGAAGCCCTGAAGAAAAAGGCCGAATCGCTCAAA
AATCCCAAGGTCAGCGAAGAAAAAAAGCTGGAGTTCATCCGCGCCAAACAGGACCTGGACCAGAAGACCCGCAACTTCCT
GCGCAAGGTTGAGCAGGAAGAAGTGAAGCTGCGTCAGGACATGGTGACCCTGGTCTTCAGCGCTACCTATGAAGTGGCCC
GCACCAAGGGCTTCAACTTTGTGGTGGACGTGACCGCGGGCGGCGTTCTGTATGCCGACCAGTCAATGGACCTGACCCAG
GACGTGCTCACCGAAGTGAACAGACTTTACAAAGAAAAGAAGAACGACAAGGGCGGCAAAAAATAA

Upstream 100 bases:

>100_bases
ACACAAAAAACAGTGTTATACAAGTTTCTTACGGCGCAAGGGTCATCCCAATTCCGCAAGGACGAATATAAAAACAGCAA
TCGGGGAAGGAGTACTTTAC

Downstream 100 bases:

>100_bases
GCCCCCGCAATAAAGCGACACGGCCTCTCGACCCTGACGGGGCGAGAGGCTTTTTTTTTGCAGCAATGCCGCCTTCCATT
GTTCTGAAGGCTGCGCGGGC

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: Outer Membrane Protein OmpH; Outer Membrane Protein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRKVLMMTVAVCMLMAGAALAADSNAVPAAKIGVVDMQTVATQSEPAEAAKKQMEQKFGKERAELEKQGEALKKKAESLK
NPKVSEEKKLEFIRAKQDLDQKTRNFLRKVEQEEVKLRQDMVTLVFSATYEVARTKGFNFVVDVTAGGVLYADQSMDLTQ
DVLTEVNRLYKEKKNDKGGKK

Sequences:

>Translated_181_residues
MRKVLMMTVAVCMLMAGAALAADSNAVPAAKIGVVDMQTVATQSEPAEAAKKQMEQKFGKERAELEKQGEALKKKAESLK
NPKVSEEKKLEFIRAKQDLDQKTRNFLRKVEQEEVKLRQDMVTLVFSATYEVARTKGFNFVVDVTAGGVLYADQSMDLTQ
DVLTEVNRLYKEKKNDKGGKK
>Mature_181_residues
MRKVLMMTVAVCMLMAGAALAADSNAVPAAKIGVVDMQTVATQSEPAEAAKKQMEQKFGKERAELEKQGEALKKKAESLK
NPKVSEEKKLEFIRAKQDLDQKTRNFLRKVEQEEVKLRQDMVTLVFSATYEVARTKGFNFVVDVTAGGVLYADQSMDLTQ
DVLTEVNRLYKEKKNDKGGKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20207; Mature: 20207

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLMMTVAVCMLMAGAALAADSNAVPAAKIGVVDMQTVATQSEPAEAAKKQMEQKFGK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCH
ERAELEKQGEALKKKAESLKNPKVSEEKKLEFIRAKQDLDQKTRNFLRKVEQEEVKLRQD
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVTLVFSATYEVARTKGFNFVVDVTAGGVLYADQSMDLTQDVLTEVNRLYKEKKNDKGGK
HHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
K
C
>Mature Secondary Structure
MRKVLMMTVAVCMLMAGAALAADSNAVPAAKIGVVDMQTVATQSEPAEAAKKQMEQKFGK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCH
ERAELEKQGEALKKKAESLKNPKVSEEKKLEFIRAKQDLDQKTRNFLRKVEQEEVKLRQD
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVTLVFSATYEVARTKGFNFVVDVTAGGVLYADQSMDLTQDVLTEVNRLYKEKKNDKGGK
HHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA