| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903791
Identifier: 220903791
GI number: 220903791
Start: 624141
End: 625022
Strand: Reverse
Name: 220903791
Synonym: Ddes_0514
Alternate gene names: NA
Gene position: 625022-624141 (Counterclockwise)
Preceding gene: 220903792
Following gene: 220903790
Centisome position: 21.75
GC content: 65.31
Gene sequence:
>882_bases ATGAGCGCATATTCCACCGGGCTTGAGCTTATTCTCAATGCGGCCGAGGGCGTGTTGCAGATCATTGTCACGGATGACGA AAAACTGCTCTGCGCCCAGGAATGGCGCAGAGCTGACCGCGCCACGGAAATCCTGGCCCCGGCGCTGGAAAACATCTGCA CCGCCCTGGGCATAAAACCCGCTGTTTTCAGGCGGCTGGCCTGCGTACGCGGCCCGGGTTCCTTTACGGGCATACGGCTT GTACTGGCTACGGCGGCCGCCCTGCGCAGGGGCGGAAGGGCCGGGCTGGCCGGGCTGGATTATATGCAGGCCCTTGCCAC CACGGCCGTACAGCGCCGCCAGCTTCTTTTCGGCGCGCCCGTGTGGGCGATTACCCATGCACGGCGCAACCTCGTGCATT GCCAGTTTTTTTTGTCCTACGGGCCGATGATTCCCGCGCAGCCGCTGGCTCCGGTAGACCTGTGCACGCCGCACGAAGCC CTTGCCCGCATTCTGGACAGCCGCACAGCCCCCCTGCCCCAGGGGGTTCCCGCAGGCAGCCGCATAGTGTGGGCCTGCGG CAGCGGGCTTGCCCGGAATGCCGCGGTATTCTCCTCGCTGGATCCCCTGCGCCCCTCCCCGGACGGCAGCCAGTACTGCG CCGACACCGAAAACGCGCCGGTCACGGCACTGGATGACCTGGTAAACCCCGACATCCAGTCCCTGTGCCTGCTTGCCCGG CACGGCGACTATGCCAATGCCGACCTGGAACCTTTCTATGTGCGCCCCTGCGATGCGGTTGAAAATCTGCCCCAGCTGGC TCCGCGCCAGGGGCTTACAAGCGAAACCGCCTCCGCTGCCCTGGAACTGCTGCTGCAACGGCCGCCCCGCAGTGACATAT AG
Upstream 100 bases:
>100_bases TGCGGGCCGGGCTGGCCCTGCTGGTCACACTCATGCTGCTGGCCACCTACAATGACATCTGGCGCATAGTAAAGGGGGCC GGCTGGTTCGGGAGCGGATC
Downstream 100 bases:
>100_bases GACGATTTATCCTTTGAGAATGCATGTTCTCAAAGCTGGCAACATGTACCCTACGGGTTTAGAGTAATTACGGCTTCAAA TGATTGCTTAACGGTCGGCA
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: Peptidase
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSAYSTGLELILNAAEGVLQIIVTDDEKLLCAQEWRRADRATEILAPALENICTALGIKPAVFRRLACVRGPGSFTGIRL VLATAAALRRGGRAGLAGLDYMQALATTAVQRRQLLFGAPVWAITHARRNLVHCQFFLSYGPMIPAQPLAPVDLCTPHEA LARILDSRTAPLPQGVPAGSRIVWACGSGLARNAAVFSSLDPLRPSPDGSQYCADTENAPVTALDDLVNPDIQSLCLLAR HGDYANADLEPFYVRPCDAVENLPQLAPRQGLTSETASAALELLLQRPPRSDI
Sequences:
>Translated_293_residues MSAYSTGLELILNAAEGVLQIIVTDDEKLLCAQEWRRADRATEILAPALENICTALGIKPAVFRRLACVRGPGSFTGIRL VLATAAALRRGGRAGLAGLDYMQALATTAVQRRQLLFGAPVWAITHARRNLVHCQFFLSYGPMIPAQPLAPVDLCTPHEA LARILDSRTAPLPQGVPAGSRIVWACGSGLARNAAVFSSLDPLRPSPDGSQYCADTENAPVTALDDLVNPDIQSLCLLAR HGDYANADLEPFYVRPCDAVENLPQLAPRQGLTSETASAALELLLQRPPRSDI >Mature_292_residues SAYSTGLELILNAAEGVLQIIVTDDEKLLCAQEWRRADRATEILAPALENICTALGIKPAVFRRLACVRGPGSFTGIRLV LATAAALRRGGRAGLAGLDYMQALATTAVQRRQLLFGAPVWAITHARRNLVHCQFFLSYGPMIPAQPLAPVDLCTPHEAL ARILDSRTAPLPQGVPAGSRIVWACGSGLARNAAVFSSLDPLRPSPDGSQYCADTENAPVTALDDLVNPDIQSLCLLARH GDYANADLEPFYVRPCDAVENLPQLAPRQGLTSETASAALELLLQRPPRSDI
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31395; Mature: 31264
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYSTGLELILNAAEGVLQIIVTDDEKLLCAQEWRRADRATEILAPALENICTALGIKP CCCHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVFRRLACVRGPGSFTGIRLVLATAAALRRGGRAGLAGLDYMQALATTAVQRRQLLFGAP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VWAITHARRNLVHCQFFLSYGPMIPAQPLAPVDLCTPHEALARILDSRTAPLPQGVPAGS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC RIVWACGSGLARNAAVFSSLDPLRPSPDGSQYCADTENAPVTALDDLVNPDIQSLCLLAR EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH HGDYANADLEPFYVRPCDAVENLPQLAPRQGLTSETASAALELLLQRPPRSDI CCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAYSTGLELILNAAEGVLQIIVTDDEKLLCAQEWRRADRATEILAPALENICTALGIKP CCHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVFRRLACVRGPGSFTGIRLVLATAAALRRGGRAGLAGLDYMQALATTAVQRRQLLFGAP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VWAITHARRNLVHCQFFLSYGPMIPAQPLAPVDLCTPHEALARILDSRTAPLPQGVPAGS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC RIVWACGSGLARNAAVFSSLDPLRPSPDGSQYCADTENAPVTALDDLVNPDIQSLCLLAR EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH HGDYANADLEPFYVRPCDAVENLPQLAPRQGLTSETASAALELLLQRPPRSDI CCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA