| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903789
Identifier: 220903789
GI number: 220903789
Start: 621131
End: 622060
Strand: Reverse
Name: 220903789
Synonym: Ddes_0512
Alternate gene names: NA
Gene position: 622060-621131 (Counterclockwise)
Preceding gene: 220903790
Following gene: 220903787
Centisome position: 21.65
GC content: 59.03
Gene sequence:
>930_bases ATGGGCTTTTTTTACAGCATGCTCTCTTCGGCAGCCTTCGGGCTTATCCCCCTTTTCAGCCTGCCGCTCATGGCCAGAGG ACTTTCTCCGGCTACCGTACTTTTTTACCGTTTTTTCATTGCTTCCATTGTACTGGGGATACTGCTCCTCCTACGCGGCG AGCGCCTGCATACCTCGGGCCGCAACCTTGCCAAACTGACGGGCATGAGCCTCATGTACGCCATGGCGGCCCTGCTGTTC ATGCAGGCGTTCAAGTACATGCCGAGCGGCGTGGCGGCGACCCTGCATTTTTCTTACCCGGTAATGGTCATGCTCATGAT GATTATCTTCTTTCATGAGCGTTTTTCCGCGGTCACCGCTCTGGCCGTGGTTCTGGCCATCAGTGGCGTATACCTGCTGA GCGGCGGCGCGCAGCCCGGCAGCGTAGCGGACATGAGCATGTTCGGCCTGGCGCTGGCCCTGGCTTCCGCCCTGTGCAAT GCCATCTACATCACCAGCCTTTGCGCAGCCCGCATCAGCAATATGACGGGCCTTGTGCTCACTTTTTATGTAATGGCCTT CGGCGCGTTATGCTCGCTGGCAAACTCGCTGGCAACAAACAGCTTCCAGTTGCTGCAAAGCTGGCAGGAACTGGCCCTGG CCGCCCTGCTGGCCATAGTAACAGCGGTGCTTTCCAACTACACCCTCATCCTGGCCGTACAGCGCATCGGCTCTACCCTG GCGGCAGTGATGGGCGTGCTGGAGCCTGTTACCGCAGTGGTCGTGGGCATACTGGTGTTCAACGAGCCGTTCAGCCTGTC GCTGGTTACAGGACTGGCCCTTATTGCGGTTTCGGTGGTTCTGGTCATGCTTGGCGGCCACATACGCCACCTGCTGGAGC GCCGTAAAGCAAGGCGCACGGGTGACAATCCCGGAGCATCCGGCCGCTGA
Upstream 100 bases:
>100_bases TCGGGCCGACAGGCATTTTCCACCGCCGGAGCGGGGGCCTTGCCACCCCTGTGCTTATTCTGTATGAGCCTCTTGCACCT CATGTTCAAAGAAGGATGTC
Downstream 100 bases:
>100_bases CCCGCCGGTGACACCGCCCGCCCTGTCTACCCGCATATGCGGCATCGCCGTCTGCACTGCCTGACAAAATTTCTGTATAA ACAAAAACGCCCGGATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MGFFYSMLSSAAFGLIPLFSLPLMARGLSPATVLFYRFFIASIVLGILLLLRGERLHTSGRNLAKLTGMSLMYAMAALLF MQAFKYMPSGVAATLHFSYPVMVMLMMIIFFHERFSAVTALAVVLAISGVYLLSGGAQPGSVADMSMFGLALALASALCN AIYITSLCAARISNMTGLVLTFYVMAFGALCSLANSLATNSFQLLQSWQELALAALLAIVTAVLSNYTLILAVQRIGSTL AAVMGVLEPVTAVVVGILVFNEPFSLSLVTGLALIAVSVVLVMLGGHIRHLLERRKARRTGDNPGASGR
Sequences:
>Translated_309_residues MGFFYSMLSSAAFGLIPLFSLPLMARGLSPATVLFYRFFIASIVLGILLLLRGERLHTSGRNLAKLTGMSLMYAMAALLF MQAFKYMPSGVAATLHFSYPVMVMLMMIIFFHERFSAVTALAVVLAISGVYLLSGGAQPGSVADMSMFGLALALASALCN AIYITSLCAARISNMTGLVLTFYVMAFGALCSLANSLATNSFQLLQSWQELALAALLAIVTAVLSNYTLILAVQRIGSTL AAVMGVLEPVTAVVVGILVFNEPFSLSLVTGLALIAVSVVLVMLGGHIRHLLERRKARRTGDNPGASGR >Mature_308_residues GFFYSMLSSAAFGLIPLFSLPLMARGLSPATVLFYRFFIASIVLGILLLLRGERLHTSGRNLAKLTGMSLMYAMAALLFM QAFKYMPSGVAATLHFSYPVMVMLMMIIFFHERFSAVTALAVVLAISGVYLLSGGAQPGSVADMSMFGLALALASALCNA IYITSLCAARISNMTGLVLTFYVMAFGALCSLANSLATNSFQLLQSWQELALAALLAIVTAVLSNYTLILAVQRIGSTLA AVMGVLEPVTAVVVGILVFNEPFSLSLVTGLALIAVSVVLVMLGGHIRHLLERRKARRTGDNPGASGR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32865; Mature: 32734
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFYSMLSSAAFGLIPLFSLPLMARGLSPATVLFYRFFIASIVLGILLLLRGERLHTSG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC RNLAKLTGMSLMYAMAALLFMQAFKYMPSGVAATLHFSYPVMVMLMMIIFFHERFSAVTA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVVLAISGVYLLSGGAQPGSVADMSMFGLALALASALCNAIYITSLCAARISNMTGLVL HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TFYVMAFGALCSLANSLATNSFQLLQSWQELALAALLAIVTAVLSNYTLILAVQRIGSTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH AAVMGVLEPVTAVVVGILVFNEPFSLSLVTGLALIAVSVVLVMLGGHIRHLLERRKARRT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDNPGASGR CCCCCCCCC >Mature Secondary Structure GFFYSMLSSAAFGLIPLFSLPLMARGLSPATVLFYRFFIASIVLGILLLLRGERLHTSG CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC RNLAKLTGMSLMYAMAALLFMQAFKYMPSGVAATLHFSYPVMVMLMMIIFFHERFSAVTA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVVLAISGVYLLSGGAQPGSVADMSMFGLALALASALCNAIYITSLCAARISNMTGLVL HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TFYVMAFGALCSLANSLATNSFQLLQSWQELALAALLAIVTAVLSNYTLILAVQRIGSTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH AAVMGVLEPVTAVVVGILVFNEPFSLSLVTGLALIAVSVVLVMLGGHIRHLLERRKARRT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDNPGASGR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA