| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is iorB [H]
Identifier: 220903722
GI number: 220903722
Start: 537093
End: 537701
Strand: Direct
Name: iorB [H]
Synonym: Ddes_0444
Alternate gene names: 220903722
Gene position: 537093-537701 (Clockwise)
Preceding gene: 220903721
Following gene: 220903739
Centisome position: 18.69
GC content: 63.38
Gene sequence:
>609_bases ATGACTATGCAGAACAAGCAGAAGCGCATGCGCGTTTACTTTACCGGCGTGGGCGGCCAGGGAACCCTTACGGCCACGAC CTTGCTGGCCCGTACGGCCCTTGAGGCCGGGCTGGATGTGGTGGCGGGCGAAGTGCACGGCATGGCCCAGCGCGGCGGCG TGGTGGAATCTGTCATGCTGTTGGGCGGCTGGCGTTCGCCCAAACTGGACCTTGGCGAGGCTGACGTCATGCTGGGCTTT GAACCTTTGGAAACCCTGCGTGGCCTGCCCTATCTGCGGCAGGGCGGCACGGTGTTTTCCAGCAGCGACGCGCTGCCGCC CGTGGGAGTGTCGCTGGGCAAGGCCGTGTACCCTGATATGGCGCACATAGAATCCAGTGCGCGCGCGATCGCCGGACAGT GCCTTTTTATTCCCTGCCGTGAACTGGGCAGGCAGGCAGGCTCTGTGCAGAGCGGCAATACCGTGCTCTTGAGCGCGGTA TGCGCTTCCGGCGTGCTGCCCTTTGGTGTGGACGCGCTGGAGGCGGCCATCAAAAAATTCCTGCCCCCGAAACTTCAGGA GGTGAACCTGAAGGCGCTTGAGCTTGGCAGGCAAGTCCTCAAGGGCTGA
Upstream 100 bases:
>100_bases CTGGAGGTGGATGCGACCCTCTGCACGGGCTGCATGGTGTGTTTGCAGGTGGCCCCCGGGGCTTTCAAGGCGCGCAAGCG CCAGGGATAGGTGAAAGACA
Downstream 100 bases:
>100_bases TGCGGTCAAGCGAAAAACAGGCATAGGATATAAATGCAGCGGCCCGGCCTGTATAAGGCCGGGCCGTTTTTTTGTCAGCA GGAAAAACCGCCCCAGGCCT
Product: Indolepyruvate ferredoxin oxidoreductase
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTMQNKQKRMRVYFTGVGGQGTLTATTLLARTALEAGLDVVAGEVHGMAQRGGVVESVMLLGGWRSPKLDLGEADVMLGF EPLETLRGLPYLRQGGTVFSSSDALPPVGVSLGKAVYPDMAHIESSARAIAGQCLFIPCRELGRQAGSVQSGNTVLLSAV CASGVLPFGVDALEAAIKKFLPPKLQEVNLKALELGRQVLKG
Sequences:
>Translated_202_residues MTMQNKQKRMRVYFTGVGGQGTLTATTLLARTALEAGLDVVAGEVHGMAQRGGVVESVMLLGGWRSPKLDLGEADVMLGF EPLETLRGLPYLRQGGTVFSSSDALPPVGVSLGKAVYPDMAHIESSARAIAGQCLFIPCRELGRQAGSVQSGNTVLLSAV CASGVLPFGVDALEAAIKKFLPPKLQEVNLKALELGRQVLKG >Mature_201_residues TMQNKQKRMRVYFTGVGGQGTLTATTLLARTALEAGLDVVAGEVHGMAQRGGVVESVMLLGGWRSPKLDLGEADVMLGFE PLETLRGLPYLRQGGTVFSSSDALPPVGVSLGKAVYPDMAHIESSARAIAGQCLFIPCRELGRQAGSVQSGNTVLLSAVC ASGVLPFGVDALEAAIKKFLPPKLQEVNLKALELGRQVLKG
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 21221; Mature: 21090
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQNKQKRMRVYFTGVGGQGTLTATTLLARTALEAGLDVVAGEVHGMAQRGGVVESVML CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHH LGGWRSPKLDLGEADVMLGFEPLETLRGLPYLRQGGTVFSSSDALPPVGVSLGKAVYPDM HCCCCCCCCCCCCCCEEECCCHHHHHCCCCCHHCCCEEEECCCCCCCCCHHHCHHHCCCH AHIESSARAIAGQCLFIPCRELGRQAGSVQSGNTVLLSAVCASGVLPFGVDALEAAIKKF HHHHHHHHHHHCCEEEEEHHHHCHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH LPPKLQEVNLKALELGRQVLKG CCCCHHHCCHHHHHHHHHHHCC >Mature Secondary Structure TMQNKQKRMRVYFTGVGGQGTLTATTLLARTALEAGLDVVAGEVHGMAQRGGVVESVML CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHH LGGWRSPKLDLGEADVMLGFEPLETLRGLPYLRQGGTVFSSSDALPPVGVSLGKAVYPDM HCCCCCCCCCCCCCCEEECCCHHHHHCCCCCHHCCCEEEECCCCCCCCCHHHCHHHCCCH AHIESSARAIAGQCLFIPCRELGRQAGSVQSGNTVLLSAVCASGVLPFGVDALEAAIKKF HHHHHHHHHHHCCEEEEEHHHHCHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH LPPKLQEVNLKALELGRQVLKG CCCCHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]