| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is punA [H]
Identifier: 220903739
GI number: 220903739
Start: 557374
End: 558285
Strand: Direct
Name: punA [H]
Synonym: Ddes_0461
Alternate gene names: 220903739
Gene position: 557374-558285 (Clockwise)
Preceding gene: 220903722
Following gene: 220903740
Centisome position: 19.4
GC content: 59.98
Gene sequence:
>912_bases ATGCAAAATCCGCAAGAAGTCCAGTCGGCCGCGGCGGCTCTGCGCAAGGCTCTGGAGGCTGCGCCATGCAGCTTTTCACA GGTTATGGGCATGCGAAAAATCACCGGCGCTACGGCAGAAGACAACAGTGTTCCCGTTGGTCTTGTGCTGGGTACGGGCC TTTCGGGTCTGGCGGACCGGCTGGCGGAGCGGGTAGCCGTGCCTTATGCCGATCTGCCGGGTTTTCCCGTATCCAGCGTG GATTCGCATGTGGGAGCCTTTGTGTGGGGGCGTTTTCCCTCATCCTGCGGCGAGGACGATGTACCGGGCCGTCCTGTGCT TATCCAGCAGGGGCGCTGCCACCTTTATGAAGGCCGCAGCCCGGCCGAAGTGTGTATGGGGGTGCGCGTCATGGCGGCCA TGGGCGTCAAGACGCTGGTGATCACCAACGCGGCGGGGGCGCTTAATCCCCATTTTGACGCCGGGTCCATCATGTGTATG AGCGATTTTATCAACCATACGGGGTATTCGCCTCTGCTCGGCTGTAACTGCGAGCAATGGGGACCGCGTTTTCCCGACAT GAGCGCGCCCTTTGATGCGGACCTGCGCACCCTTGCCATGGAAACTTCCGCCAGGCTGGGCCTGCGGCTGGAACGCGGCG TGTACATTGGCGTGCGCGGCCCTGAAATGGAAACCCCTGCCGAAACGCGCATGTACCGGCAGTGGGGAGCCGATGCTGTG GGCATGAGCACGGTGCTTGAGGTCATTGCGGCGCGCCATCTGGGTATGCGCGTGCTTGGCCTTTCATGTATTTCAAATAA AAACTTGCCGGACTGTATGACCCCGGCGCCTTTGGAAGAAATTATTCTTGTGGCTGCCCAGGCGGGTAAAAATCTGGGCC GCCTCATACGGGCAATGATGACAAAACTTTAA
Upstream 100 bases:
>100_bases TGAAAATCCACACGCAGTACTGTGGGCGGATGAAAAAAGTCGCCCCCGGTCATTGCGCGGCATTACCCGCTGCGGCACTG TTAAAATCAGGAGGGATAAT
Downstream 100 bases:
>100_bases AAAATACGTACAAGCGCAGCCCGGACTCATTTTTTTACACTAAAAGGCAAAGCGCCCATGCATTATAACGATTCTCTTCG CAACGTTGCTATTATCGCCC
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQNPQEVQSAAAALRKALEAAPCSFSQVMGMRKITGATAEDNSVPVGLVLGTGLSGLADRLAERVAVPYADLPGFPVSSV DSHVGAFVWGRFPSSCGEDDVPGRPVLIQQGRCHLYEGRSPAEVCMGVRVMAAMGVKTLVITNAAGALNPHFDAGSIMCM SDFINHTGYSPLLGCNCEQWGPRFPDMSAPFDADLRTLAMETSARLGLRLERGVYIGVRGPEMETPAETRMYRQWGADAV GMSTVLEVIAARHLGMRVLGLSCISNKNLPDCMTPAPLEEIILVAAQAGKNLGRLIRAMMTKL
Sequences:
>Translated_303_residues MQNPQEVQSAAAALRKALEAAPCSFSQVMGMRKITGATAEDNSVPVGLVLGTGLSGLADRLAERVAVPYADLPGFPVSSV DSHVGAFVWGRFPSSCGEDDVPGRPVLIQQGRCHLYEGRSPAEVCMGVRVMAAMGVKTLVITNAAGALNPHFDAGSIMCM SDFINHTGYSPLLGCNCEQWGPRFPDMSAPFDADLRTLAMETSARLGLRLERGVYIGVRGPEMETPAETRMYRQWGADAV GMSTVLEVIAARHLGMRVLGLSCISNKNLPDCMTPAPLEEIILVAAQAGKNLGRLIRAMMTKL >Mature_303_residues MQNPQEVQSAAAALRKALEAAPCSFSQVMGMRKITGATAEDNSVPVGLVLGTGLSGLADRLAERVAVPYADLPGFPVSSV DSHVGAFVWGRFPSSCGEDDVPGRPVLIQQGRCHLYEGRSPAEVCMGVRVMAAMGVKTLVITNAAGALNPHFDAGSIMCM SDFINHTGYSPLLGCNCEQWGPRFPDMSAPFDADLRTLAMETSARLGLRLERGVYIGVRGPEMETPAETRMYRQWGADAV GMSTVLEVIAARHLGMRVLGLSCISNKNLPDCMTPAPLEEIILVAAQAGKNLGRLIRAMMTKL
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=265, Percent_Identity=42.2641509433962, Blast_Score=198, Evalue=4e-51, Organism=Homo sapiens, GI47132622, Length=225, Percent_Identity=28.4444444444444, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1788746, Length=226, Percent_Identity=39.3805309734513, Blast_Score=169, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17541190, Length=264, Percent_Identity=35.9848484848485, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323238, Length=279, Percent_Identity=38.3512544802867, Blast_Score=170, Evalue=3e-43, Organism=Drosophila melanogaster, GI24656090, Length=271, Percent_Identity=39.8523985239852, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI24656093, Length=271, Percent_Identity=39.8523985239852, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI45552887, Length=227, Percent_Identity=42.7312775330396, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI45552885, Length=227, Percent_Identity=42.7312775330396, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI24762376, Length=224, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 32321; Mature: 32321
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPQEVQSAAAALRKALEAAPCSFSQVMGMRKITGATAEDNSVPVGLVLGTGLSGLADR CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHH LAERVAVPYADLPGFPVSSVDSHVGAFVWGRFPSSCGEDDVPGRPVLIQQGRCHLYEGRS HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCC PAEVCMGVRVMAAMGVKTLVITNAAGALNPHFDAGSIMCMSDFINHTGYSPLLGCNCEQW HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH GPRFPDMSAPFDADLRTLAMETSARLGLRLERGVYIGVRGPEMETPAETRMYRQWGADAV CCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCEEEEECCCCCCCCHHHHHHHHHCCCHH GMSTVLEVIAARHLGMRVLGLSCISNKNLPDCMTPAPLEEIILVAAQAGKNLGRLIRAMM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH TKL HCC >Mature Secondary Structure MQNPQEVQSAAAALRKALEAAPCSFSQVMGMRKITGATAEDNSVPVGLVLGTGLSGLADR CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHH LAERVAVPYADLPGFPVSSVDSHVGAFVWGRFPSSCGEDDVPGRPVLIQQGRCHLYEGRS HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCC PAEVCMGVRVMAAMGVKTLVITNAAGALNPHFDAGSIMCMSDFINHTGYSPLLGCNCEQW HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH GPRFPDMSAPFDADLRTLAMETSARLGLRLERGVYIGVRGPEMETPAETRMYRQWGADAV CCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCEEEEECCCCCCCCHHHHHHHHHCCCHH GMSTVLEVIAARHLGMRVLGLSCISNKNLPDCMTPAPLEEIILVAAQAGKNLGRLIRAMM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH TKL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9058965 [H]