Click here to switch to the map view.

The map label for this gene is yneB [C]

Identifier: 220903618

GI number: 220903618

Start: 411340

End: 412137

Strand: Reverse

Name: yneB [C]

Synonym: Ddes_0338

Alternate gene names: 220903618

Gene position: 412137-411340 (Counterclockwise)

Preceding gene: 220903622

Following gene: 220903617

Centisome position: 14.34

GC content: 59.52

Gene sequence:

>798_bases
ATGTACCTTGGAAAAAAAGTTCGTCTTGAACGAATTATAAATCGTGAAAACGGGCGAACCATTATCGTACCTATGGACCA
TGGCGTTACCATAGGTGCAGTTGATGGCCTTATGGATATGCGCGAGGCCGTCAACGACATGGCCCGGGGCGGCGCGGACG
CGGTGCTCATGCACAAGGGCCTTGTGCGCTGCTCGCACCGCAGTGCGGGCAAGGACATCGGCCTTATCGTCCACCTTTCC
GCCTCCACGGCCCTGACGCCCAACGGCAATACCAAAACCCTGGTCGGCACGGTAGAAGAAGGCATCAAGCACGGGGCGGA
CTGCGTGTCTGTTCACGTCAACCTGGGCGATCCCAATGAGCGGCTCATGCTGGCAGACCTCGGCAGGGTGGCCGAAGCCT
GCGACAACTGGCACATCCCCCTGCTGGCCATGATGTATGCCCGCGGTCCGCAGATTCAGGACGGCTTTGCTAAAAATGTG
GTGGCCCATTGCGCCCGCGTCGGTGTGGAACTGGGTGCAGACATCGTAAAGGTTCCCTACACCGGCGATGTGGACAGCTT
TGCAGAAGTTGTGGCCTCCTGCTGCGTGCCTGTGGTCATTGCCGGGGGCGAGCGCATGGAGTCCACGCGCCAGATACTCC
AGATGGTGCACGACTCCATCAAGGCGGGCGGCGCGGGCATTTCCGTGGGCCGCAACGTTTTCCAGCACCCCAGCCGAGTT
AATCTTGTCAAGGCCCTGCGGGCCATCGTGCATGAAAACGCCAGTGTGGACCAAGCCATCACTATGGTGGGAGAATAA

Upstream 100 bases:

>100_bases
GGGCAGCCGGTCTTCAAAATGCCCACGCCGAGCGGTCCAGGCTACAGGCAATATGCAATTTGACTGCAATACGCACGTCA
ACAACTAAAAGGAGCAGGCC

Downstream 100 bases:

>100_bases
CAATATGTCGCGCATTTATTTCAGTTGTGTCCCCTTTGACAAGGGCGATGTGACGCTTGCTCTCGAATCGGGCGTGGACG
GCGTTATTGTACCCGCCGAA

Product: fructose-bisphosphate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MYLGKKVRLERIINRENGRTIIVPMDHGVTIGAVDGLMDMREAVNDMARGGADAVLMHKGLVRCSHRSAGKDIGLIVHLS
ASTALTPNGNTKTLVGTVEEGIKHGADCVSVHVNLGDPNERLMLADLGRVAEACDNWHIPLLAMMYARGPQIQDGFAKNV
VAHCARVGVELGADIVKVPYTGDVDSFAEVVASCCVPVVIAGGERMESTRQILQMVHDSIKAGGAGISVGRNVFQHPSRV
NLVKALRAIVHENASVDQAITMVGE

Sequences:

>Translated_265_residues
MYLGKKVRLERIINRENGRTIIVPMDHGVTIGAVDGLMDMREAVNDMARGGADAVLMHKGLVRCSHRSAGKDIGLIVHLS
ASTALTPNGNTKTLVGTVEEGIKHGADCVSVHVNLGDPNERLMLADLGRVAEACDNWHIPLLAMMYARGPQIQDGFAKNV
VAHCARVGVELGADIVKVPYTGDVDSFAEVVASCCVPVVIAGGERMESTRQILQMVHDSIKAGGAGISVGRNVFQHPSRV
NLVKALRAIVHENASVDQAITMVGE
>Mature_265_residues
MYLGKKVRLERIINRENGRTIIVPMDHGVTIGAVDGLMDMREAVNDMARGGADAVLMHKGLVRCSHRSAGKDIGLIVHLS
ASTALTPNGNTKTLVGTVEEGIKHGADCVSVHVNLGDPNERLMLADLGRVAEACDNWHIPLLAMMYARGPQIQDGFAKNV
VAHCARVGVELGADIVKVPYTGDVDSFAEVVASCCVPVVIAGGERMESTRQILQMVHDSIKAGGAGISVGRNVFQHPSRV
NLVKALRAIVHENASVDQAITMVGE

Specific function: Unknown

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=259, Percent_Identity=25.4826254826255, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010210
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 28226; Mature: 28226

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGKKVRLERIINRENGRTIIVPMDHGVTIGAVDGLMDMREAVNDMARGGADAVLMHKG
CCCCHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LVRCSHRSAGKDIGLIVHLSASTALTPNGNTKTLVGTVEEGIKHGADCVSVHVNLGDPNE
HHHHCCCCCCCCEEEEEEECCCEEECCCCCCEEEEEHHHHHHHCCCCEEEEEEECCCCCC
RLMLADLGRVAEACDNWHIPLLAMMYARGPQIQDGFAKNVVAHCARVGVELGADIVKVPY
EEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCC
TGDVDSFAEVVASCCVPVVIAGGERMESTRQILQMVHDSIKAGGAGISVGRNVFQHPSRV
CCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
NLVKALRAIVHENASVDQAITMVGE
HHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MYLGKKVRLERIINRENGRTIIVPMDHGVTIGAVDGLMDMREAVNDMARGGADAVLMHKG
CCCCHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LVRCSHRSAGKDIGLIVHLSASTALTPNGNTKTLVGTVEEGIKHGADCVSVHVNLGDPNE
HHHHCCCCCCCCEEEEEEECCCEEECCCCCCEEEEEHHHHHHHCCCCEEEEEEECCCCCC
RLMLADLGRVAEACDNWHIPLLAMMYARGPQIQDGFAKNVVAHCARVGVELGADIVKVPY
EEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCC
TGDVDSFAEVVASCCVPVVIAGGERMESTRQILQMVHDSIKAGGAGISVGRNVFQHPSRV
CCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
NLVKALRAIVHENASVDQAITMVGE
HHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]