Click here to switch to the map view.

The map label for this gene is 220903617

Identifier: 220903617

GI number: 220903617

Start: 410352

End: 411335

Strand: Reverse

Name: 220903617

Synonym: Ddes_0337

Alternate gene names: NA

Gene position: 411335-410352 (Counterclockwise)

Preceding gene: 220903618

Following gene: 220903616

Centisome position: 14.32

GC content: 61.69

Gene sequence:

>984_bases
ATGTCGCGCATTTATTTCAGTTGTGTCCCCTTTGACAAGGGCGATGTGACGCTTGCTCTCGAATCGGGCGTGGACGGCGT
TATTGTACCCGCCGAACATGTGGAACAGGTGGCCAGTCTTTCGCGCTGCCCCGTATGGGCCGCCGAAGAAACTCCTCTGG
TGACCCTTGGCGCCAAGGCTGACGAAGAGGCCGTACTGCAACGACTGCACAAGGGCGAGCGCGTGGTGCTGGCGCGCGGA
TGGGAGGTTATTCCTGTAGAAAACCTTCTGGCCCAGAGCGACAGCGTACTGGCTGAAGCCGGTACACTGGACGAGGCCCG
CCTTGCCGCAGGTATTCTGGAACGCGGTGTGGCGGGCATTGTTGTATCCAGGGCGGCCGTGGCCGACCTCAAGGATATCG
TGGCCCAGTGCAAGATGGCTCGCAGCCGTGAAGAGCTGATGCCCGCCGTGGTCACCCGCGTGGAGCCTGTGGGGCTAGGG
CACCGCGTCTGCGCCGACACACTCTCCCTGCTGCGCAAGGGCCAGGGCATGCTGGTGGGCAATTCCAGCGCCTTCACCTT
TCTTGTGCATGCCGAAACCGAGCGCAATGAATATGTGGCTGCCCGCCCCTTCAGAGTCAATGCCGGAGCCGTACACGCCT
ATGTTCGTCTGCCCGGCGACCATACTACCTACCTTGGTGAATTCCGCGCCGGACAGGAAGTGCTTGTTGTGGATTACACA
GGCGAAACCAGCGTGGCCACGCTCGGCAGGGTCAAGATAGAAGTGCGCCCCATGTTGCTTGTGGAAGCCCAGGTCGAAAC
CCCCGAAGGCGTAAAAACCGGTACGGTGTTCCTCCAGAATGCCGAAACCATCCGCCTGACCACCCCCGAAGGCGAAGCCG
TAAGCGTGGTCGGGCTGAAGCCCGGCGACCGCGTGCTCTGCCGTCTGGACGAGGCGGGCCGTCATTTCGGCATGCGCGTA
CGCGAAGACATACAGGAGGTATAG

Upstream 100 bases:

>100_bases
CAGCACCCCAGCCGAGTTAATCTTGTCAAGGCCCTGCGGGCCATCGTGCATGAAAACGCCAGTGTGGACCAAGCCATCAC
TATGGTGGGAGAATAACAAT

Downstream 100 bases:

>100_bases
CATGGGCGACAGCAACAGCCGCTGGCCCGGGCCGGCCTCCATGCCGGAGTGCGGACCGGAATGCGGAACAGGGCGCAAAG
AAAAAATCCACAATGCCGAC

Product: 3-dehydroquinate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSRIYFSCVPFDKGDVTLALESGVDGVIVPAEHVEQVASLSRCPVWAAEETPLVTLGAKADEEAVLQRLHKGERVVLARG
WEVIPVENLLAQSDSVLAEAGTLDEARLAAGILERGVAGIVVSRAAVADLKDIVAQCKMARSREELMPAVVTRVEPVGLG
HRVCADTLSLLRKGQGMLVGNSSAFTFLVHAETERNEYVAARPFRVNAGAVHAYVRLPGDHTTYLGEFRAGQEVLVVDYT
GETSVATLGRVKIEVRPMLLVEAQVETPEGVKTGTVFLQNAETIRLTTPEGEAVSVVGLKPGDRVLCRLDEAGRHFGMRV
REDIQEV

Sequences:

>Translated_327_residues
MSRIYFSCVPFDKGDVTLALESGVDGVIVPAEHVEQVASLSRCPVWAAEETPLVTLGAKADEEAVLQRLHKGERVVLARG
WEVIPVENLLAQSDSVLAEAGTLDEARLAAGILERGVAGIVVSRAAVADLKDIVAQCKMARSREELMPAVVTRVEPVGLG
HRVCADTLSLLRKGQGMLVGNSSAFTFLVHAETERNEYVAARPFRVNAGAVHAYVRLPGDHTTYLGEFRAGQEVLVVDYT
GETSVATLGRVKIEVRPMLLVEAQVETPEGVKTGTVFLQNAETIRLTTPEGEAVSVVGLKPGDRVLCRLDEAGRHFGMRV
REDIQEV
>Mature_326_residues
SRIYFSCVPFDKGDVTLALESGVDGVIVPAEHVEQVASLSRCPVWAAEETPLVTLGAKADEEAVLQRLHKGERVVLARGW
EVIPVENLLAQSDSVLAEAGTLDEARLAAGILERGVAGIVVSRAAVADLKDIVAQCKMARSREELMPAVVTRVEPVGLGH
RVCADTLSLLRKGQGMLVGNSSAFTFLVHAETERNEYVAARPFRVNAGAVHAYVRLPGDHTTYLGEFRAGQEVLVVDYTG
ETSVATLGRVKIEVRPMLLVEAQVETPEGVKTGTVFLQNAETIRLTTPEGEAVSVVGLKPGDRVLCRLDEAGRHFGMRVR
EDIQEV

Specific function: Unknown

COG id: COG1465

COG function: function code E; Predicted alternative 3-dehydroquinate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal-type DHQ synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002812
- ProDom:   PD017907 [H]

Pfam domain/function: PF01959 DHQS [H]

EC number: NA

Molecular weight: Translated: 35299; Mature: 35168

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIYFSCVPFDKGDVTLALESGVDGVIVPAEHVEQVASLSRCPVWAAEETPLVTLGAKA
CCEEEEEEECCCCCCEEEEEECCCCEEEECHHHHHHHHHHHCCCEEECCCCCEEEECCCC
DEEAVLQRLHKGERVVLARGWEVIPVENLLAQSDSVLAEAGTLDEARLAAGILERGVAGI
CHHHHHHHHCCCCEEEEECCCEEEEHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCHHHH
VVSRAAVADLKDIVAQCKMARSREELMPAVVTRVEPVGLGHRVCADTLSLLRKGQGMLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEE
NSSAFTFLVHAETERNEYVAARPFRVNAGAVHAYVRLPGDHTTYLGEFRAGQEVLVVDYT
CCCEEEEEEEEECCCCCEEEECCEEECCCEEEEEEEECCCCCEEEECCCCCCEEEEEEEC
GETSVATLGRVKIEVRPMLLVEAQVETPEGVKTGTVFLQNAETIRLTTPEGEAVSVVGLK
CCCCEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEEEEC
PGDRVLCRLDEAGRHFGMRVREDIQEV
CCCEEEEEECHHCHHCCCHHHHHHHCC
>Mature Secondary Structure 
SRIYFSCVPFDKGDVTLALESGVDGVIVPAEHVEQVASLSRCPVWAAEETPLVTLGAKA
CEEEEEEECCCCCCEEEEEECCCCEEEECHHHHHHHHHHHCCCEEECCCCCEEEECCCC
DEEAVLQRLHKGERVVLARGWEVIPVENLLAQSDSVLAEAGTLDEARLAAGILERGVAGI
CHHHHHHHHCCCCEEEEECCCEEEEHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCHHHH
VVSRAAVADLKDIVAQCKMARSREELMPAVVTRVEPVGLGHRVCADTLSLLRKGQGMLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEE
NSSAFTFLVHAETERNEYVAARPFRVNAGAVHAYVRLPGDHTTYLGEFRAGQEVLVVDYT
CCCEEEEEEEEECCCCCEEEECCEEECCCEEEEEEEECCCCCEEEECCCCCCEEEEEEEC
GETSVATLGRVKIEVRPMLLVEAQVETPEGVKTGTVFLQNAETIRLTTPEGEAVSVVGLK
CCCCEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEEEEC
PGDRVLCRLDEAGRHFGMRVREDIQEV
CCCEEEEEECHHCHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA