Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220903622

Identifier: 220903622

GI number: 220903622

Start: 416741

End: 417784

Strand: Reverse

Name: 220903622

Synonym: Ddes_0342

Alternate gene names: NA

Gene position: 417784-416741 (Counterclockwise)

Preceding gene: 220903623

Following gene: 220903618

Centisome position: 14.54

GC content: 62.55

Gene sequence:

>1044_bases
ATGCTGCCCACTGCCGAACTTGTCGCCAATATGAAGCAATGGCGGCAATCACTGGACAAGGAAGACCGCTGGTGCATCCT
TATCAATGCCGACCCCGATGCCCTGGCTTCGGCGTTGGCGCTGAGGCGCATTTTGTTGCCGCGGGTTCACAATGCCGACA
TTGCGCGCGTCAACGAGGTCACCCGGCCCGACAACCTCGCCATGATACGCTATCTGCGCATCCCGGTGCGCATGTGGCAG
GCGGAAAAGGCCGACCAGTACAACCGCTTTGCCATAGTGGATTCCCAGCCGCACCATCACAAGGCTTTTCACGGCGTTGT
CTTTGACTGTGTCATCGACCACCACCCCCTGCCGTCCGGCACAGATGAATCGCCCTATTCTTCCGACGCCTATTGCGATA
TCCGCCCCGGCCTCGGGGCCACCAGCACCATGATGACCCGCTACATGCAGGGCCTGCGCATGCGGCCCGGCCCCAGGCTG
GCTACCGCCCTGTTGTACGGCATACGCACCGACACGGGGGCTTTCGAACGTTCGGGCGATGAGGACGATTTTCGCGCGTA
CCAGTGGCTTTCACGCCATGCGGACAACAACCTGCTGCGGCGCATTGTGCGCAGCGAATACCTGCGTGACTGGCTGCCAC
TTTTTTCGCGCGCCTTCCGCAGTCTTACCGACTGCCGGGGCAGCGGGGCCTTTGCCTGGCTCAATGAGGTCAACAGCGCC
GACCTGCTGGTGGCTGTAGCGGACTTTTTCACCCGTGTGCACGGGCTGAAGTGGATTGCGGTGAGCGGTATTGTGGGCAA
GACTGTCATTGTCATCTTTCGCGGCGACGGCGGGCGCGACATCGGGCGCCTGGCTGACGCCTGCTTTTATGACGTGGGGC
AGGCCGGGGGACACCGCAACATGGGCAGGGCGGAGTTTCCGCTGGCGGCGGTTCCGGAAAACGTCAAGGTGACGGACTTT
GTGCTGAAACGCCTGCAGACACGCAAGCTGCGCCGCGCCACATCCCCTGCTGCTGAAGACAAGGGCAGCCCCCGCACCCC
CTAG

Upstream 100 bases:

>100_bases
CGCCGGATGTGTCCTGGGGCTGAAGGCAAAAGCAAAGCCATGCGGCGTATGTATCCGCCGTGCAATCAGGGGCATCGGCC
TCGGGAGGATGAACACAGCA

Downstream 100 bases:

>100_bases
GCACCCGCCCGTAAAACCAGCACGACGCCCGCTACGCGTGGCTGGGCAAAGGCGTATGGAGACGGCATCTTGACCGCAAG
TTCCTTCGGGGCAGCGGTGC

Product: phosphoesterase RecJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEVTRPDNLAMIRYLRIPVRMWQ
AEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSGTDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRL
ATALLYGIRTDTGAFERSGDEDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA
DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRNMGRAEFPLAAVPENVKVTDF
VLKRLQTRKLRRATSPAAEDKGSPRTP

Sequences:

>Translated_347_residues
MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEVTRPDNLAMIRYLRIPVRMWQ
AEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSGTDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRL
ATALLYGIRTDTGAFERSGDEDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA
DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRNMGRAEFPLAAVPENVKVTDF
VLKRLQTRKLRRATSPAAEDKGSPRTP
>Mature_347_residues
MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEVTRPDNLAMIRYLRIPVRMWQ
AEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSGTDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRL
ATALLYGIRTDTGAFERSGDEDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA
DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRNMGRAEFPLAAVPENVKVTDF
VLKRLQTRKLRRATSPAAEDKGSPRTP

Specific function: Unknown

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR003148 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 39130; Mature: 39130

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEV
CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
TRPDNLAMIRYLRIPVRMWQAEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
TDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRLATALLYGIRTDTGAFERSGD
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
EDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRN
HHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
MGRAEFPLAAVPENVKVTDFVLKRLQTRKLRRATSPAAEDKGSPRTP
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEV
CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
TRPDNLAMIRYLRIPVRMWQAEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
TDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRLATALLYGIRTDTGAFERSGD
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
EDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRN
HHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
MGRAEFPLAAVPENVKVTDFVLKRLQTRKLRRATSPAAEDKGSPRTP
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]