| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903622
Identifier: 220903622
GI number: 220903622
Start: 416741
End: 417784
Strand: Reverse
Name: 220903622
Synonym: Ddes_0342
Alternate gene names: NA
Gene position: 417784-416741 (Counterclockwise)
Preceding gene: 220903623
Following gene: 220903618
Centisome position: 14.54
GC content: 62.55
Gene sequence:
>1044_bases ATGCTGCCCACTGCCGAACTTGTCGCCAATATGAAGCAATGGCGGCAATCACTGGACAAGGAAGACCGCTGGTGCATCCT TATCAATGCCGACCCCGATGCCCTGGCTTCGGCGTTGGCGCTGAGGCGCATTTTGTTGCCGCGGGTTCACAATGCCGACA TTGCGCGCGTCAACGAGGTCACCCGGCCCGACAACCTCGCCATGATACGCTATCTGCGCATCCCGGTGCGCATGTGGCAG GCGGAAAAGGCCGACCAGTACAACCGCTTTGCCATAGTGGATTCCCAGCCGCACCATCACAAGGCTTTTCACGGCGTTGT CTTTGACTGTGTCATCGACCACCACCCCCTGCCGTCCGGCACAGATGAATCGCCCTATTCTTCCGACGCCTATTGCGATA TCCGCCCCGGCCTCGGGGCCACCAGCACCATGATGACCCGCTACATGCAGGGCCTGCGCATGCGGCCCGGCCCCAGGCTG GCTACCGCCCTGTTGTACGGCATACGCACCGACACGGGGGCTTTCGAACGTTCGGGCGATGAGGACGATTTTCGCGCGTA CCAGTGGCTTTCACGCCATGCGGACAACAACCTGCTGCGGCGCATTGTGCGCAGCGAATACCTGCGTGACTGGCTGCCAC TTTTTTCGCGCGCCTTCCGCAGTCTTACCGACTGCCGGGGCAGCGGGGCCTTTGCCTGGCTCAATGAGGTCAACAGCGCC GACCTGCTGGTGGCTGTAGCGGACTTTTTCACCCGTGTGCACGGGCTGAAGTGGATTGCGGTGAGCGGTATTGTGGGCAA GACTGTCATTGTCATCTTTCGCGGCGACGGCGGGCGCGACATCGGGCGCCTGGCTGACGCCTGCTTTTATGACGTGGGGC AGGCCGGGGGACACCGCAACATGGGCAGGGCGGAGTTTCCGCTGGCGGCGGTTCCGGAAAACGTCAAGGTGACGGACTTT GTGCTGAAACGCCTGCAGACACGCAAGCTGCGCCGCGCCACATCCCCTGCTGCTGAAGACAAGGGCAGCCCCCGCACCCC CTAG
Upstream 100 bases:
>100_bases CGCCGGATGTGTCCTGGGGCTGAAGGCAAAAGCAAAGCCATGCGGCGTATGTATCCGCCGTGCAATCAGGGGCATCGGCC TCGGGAGGATGAACACAGCA
Downstream 100 bases:
>100_bases GCACCCGCCCGTAAAACCAGCACGACGCCCGCTACGCGTGGCTGGGCAAAGGCGTATGGAGACGGCATCTTGACCGCAAG TTCCTTCGGGGCAGCGGTGC
Product: phosphoesterase RecJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEVTRPDNLAMIRYLRIPVRMWQ AEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSGTDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRL ATALLYGIRTDTGAFERSGDEDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRNMGRAEFPLAAVPENVKVTDF VLKRLQTRKLRRATSPAAEDKGSPRTP
Sequences:
>Translated_347_residues MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEVTRPDNLAMIRYLRIPVRMWQ AEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSGTDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRL ATALLYGIRTDTGAFERSGDEDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRNMGRAEFPLAAVPENVKVTDF VLKRLQTRKLRRATSPAAEDKGSPRTP >Mature_347_residues MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEVTRPDNLAMIRYLRIPVRMWQ AEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSGTDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRL ATALLYGIRTDTGAFERSGDEDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRNMGRAEFPLAAVPENVKVTDF VLKRLQTRKLRRATSPAAEDKGSPRTP
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR003148 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 39130; Mature: 39130
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEV CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHC TRPDNLAMIRYLRIPVRMWQAEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC TDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRLATALLYGIRTDTGAFERSGD CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC EDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRN HHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC MGRAEFPLAAVPENVKVTDFVLKRLQTRKLRRATSPAAEDKGSPRTP CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLPTAELVANMKQWRQSLDKEDRWCILINADPDALASALALRRILLPRVHNADIARVNEV CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHC TRPDNLAMIRYLRIPVRMWQAEKADQYNRFAIVDSQPHHHKAFHGVVFDCVIDHHPLPSG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC TDESPYSSDAYCDIRPGLGATSTMMTRYMQGLRMRPGPRLATALLYGIRTDTGAFERSGD CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC EDDFRAYQWLSRHADNNLLRRIVRSEYLRDWLPLFSRAFRSLTDCRGSGAFAWLNEVNSA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC DLLVAVADFFTRVHGLKWIAVSGIVGKTVIVIFRGDGGRDIGRLADACFYDVGQAGGHRN HHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC MGRAEFPLAAVPENVKVTDFVLKRLQTRKLRRATSPAAEDKGSPRTP CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]