Click here to switch to the map view.

The map label for this gene is 220903445

Identifier: 220903445

GI number: 220903445

Start: 197973

End: 198314

Strand: Reverse

Name: 220903445

Synonym: Ddes_0159

Alternate gene names: NA

Gene position: 198314-197973 (Counterclockwise)

Preceding gene: 220903446

Following gene: 220903444

Centisome position: 6.9

GC content: 58.19

Gene sequence:

>342_bases
GTGGCCAAGGACGAAATAGCCTATCTCGGTTCCGATACGGTTTACGAAGGAAAACTGCATTTCAAGGGCACTGTGCGCAT
TGAAGGCAAGTTCAGCGGTGAAATTGTCAGCGAAGGCACACTCAATGTGGGCAAAGACGCCCTGGTCACCGGCAGCCTCG
ACGTGGGTGAACTGCTGCTTTCCGGCCGCTTTACCGGCGAGGTTACGGCCCGCCGTCGTGTAGTGGTCTACGGCTCCGGC
GTTCTGGAAGGCCAGGTGCAGACCCCTGTGCTTCTGACCGAAGAAGGCGGCATCATTGAGGGGCAGGTAAGCATGCAGGG
CTGCGGCAAGGTAAAAGCGTAG

Upstream 100 bases:

>100_bases
GCCACCGTAGTTAATTTCACGCTGCTGGGCATTGTGCTCAACGTGTCCATGCGGCGCTTCATGTTCAAGGGATAATTGTC
AATCCAACGGGGAGTTCGCT

Downstream 100 bases:

>100_bases
CCAGTACCTTCTGCTGCGGCGCGGGAAAGGCCTGTTCGCATGCCGCCGGGGCGCATTGCCCCAATGAGAAAAATAGCGCA
TACTCTGAATCGAGAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAKDEIAYLGSDTVYEGKLHFKGTVRIEGKFSGEIVSEGTLNVGKDALVTGSLDVGELLLSGRFTGEVTARRRVVVYGSG
VLEGQVQTPVLLTEEGGIIEGQVSMQGCGKVKA

Sequences:

>Translated_113_residues
MAKDEIAYLGSDTVYEGKLHFKGTVRIEGKFSGEIVSEGTLNVGKDALVTGSLDVGELLLSGRFTGEVTARRRVVVYGSG
VLEGQVQTPVLLTEEGGIIEGQVSMQGCGKVKA
>Mature_112_residues
AKDEIAYLGSDTVYEGKLHFKGTVRIEGKFSGEIVSEGTLNVGKDALVTGSLDVGELLLSGRFTGEVTARRRVVVYGSGV
LEGQVQTPVLLTEEGGIIEGQVSMQGCGKVKA

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11890; Mature: 11759

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDEIAYLGSDTVYEGKLHFKGTVRIEGKFSGEIVSEGTLNVGKDALVTGSLDVGELLL
CCCCCEEEECCCEEEECEEEEEEEEEECCEECCEEEECCCCCCCCCEEEECCCCHHHEEE
SGRFTGEVTARRRVVVYGSGVLEGQVQTPVLLTEEGGIIEGQVSMQGCGKVKA
CCCCCCEECCCEEEEEEECCEEECCCCCCEEEECCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
AKDEIAYLGSDTVYEGKLHFKGTVRIEGKFSGEIVSEGTLNVGKDALVTGSLDVGELLL
CCCCEEEECCCEEEECEEEEEEEEEECCEECCEEEECCCCCCCCCEEEECCCCHHHEEE
SGRFTGEVTARRRVVVYGSGVLEGQVQTPVLLTEEGGIIEGQVSMQGCGKVKA
CCCCCCEECCCEEEEEEECCEEECCCCCCEEEECCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA